RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 ZDHHC7Q9NXF8 308 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 LIMD1Q9UGP4 676 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 CLUHO75153 1309 aa11.27□□□□□ -0.61
BEST3-208ENST00000547208 DCHS1Q96JQ0 3298 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 H0YCG3 227 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 PODXLO00592 558 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 CLDN3O15551 220 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 STX6O43752 255 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 TRAK2O60296 914 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
BEST3-208ENST00000547208 CXCL8P10145 99 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 TNFSF9P41273 254 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 GTF2BQ00403 316 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 RAB33AQ14088 237 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 ZBTB41Q5SVQ8 909 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 PDXDC1Q6P996 788 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 OTOP3Q7RTS5 596 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 UBALD2Q8IYN6 164 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
BEST3-208ENST00000547208 SNX21Q969T3 373 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 PRKD2Q9BZL6 878 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
BEST3-208ENST00000547208 A0A087X0B3 334 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 A0A0B4J269 797 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 K7ENM7 598 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 TBC1D4O60343 1298 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 FAM13AO94988 1023 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 ADRB2P07550 413 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 PYGBP11216 843 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 SCP2P22307 547 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
BEST3-208ENST00000547208 HOXA9P31269 272 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
BEST3-208ENST00000547208 OR1D2P34982 312 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
BEST3-208ENST00000547208 CEBPZQ03701 1054 aaKnown RBP11.25□□□□□ -0.61
BEST3-208ENST00000547208 SLC39A14Q15043 492 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 ELMSAN1Q6PJG2 1045 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 FBXL6Q8N531 539 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
BEST3-208ENST00000547208 MYADMQ96S97 322 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 KCNH6Q9H252 994 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 ST6GALNAC4Q9H4F1 302 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 CDY1Q9Y6F8 540 aa11.25□□□□□ -0.61
BEST3-208ENST00000547208 MYMKA6NI61 221 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 HNRNPDLO14979 420 aaKnown RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 TRAPPC3O43617 180 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 TBCAO75347 108 aaKnown RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 PPP1R37O75864 691 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 C8AP07357 584 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 CLTAP09496 248 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 LIG4P49917 911 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 SPAG1Q07617 926 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 ENOX2Q16206 610 aaKnown RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 ZC2HC1CQ53FD0 456 aaPredicted RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 RASSF8Q8NHQ8 419 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 BICD1Q96G01 975 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 STRA6Q9BX79 667 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
BEST3-208ENST00000547208 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 EPS15L1Q9UBC2 864 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 CCDC39Q9UFE4 941 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
BEST3-208ENST00000547208 RIF1Q5UIP0 2472 aaKnown RBP11.23□□□□□ -0.61
BEST3-208ENST00000547208 WDR27A2RRH5 827 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 LACTBL1A8MY62 500 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 TISP43B9A030 160 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 SYN3O14994 580 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 OGTO15294 1046 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 ABLIM3O94929 683 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 KRT18P05783 430 aaKnown RBP11.23□□□□□ -0.61
BEST3-208ENST00000547208 POU2F2P09086 479 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 HNRNPA1P09651 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
BEST3-208ENST00000547208 LRPAP1P30533 357 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
BEST3-208ENST00000547208 NTHL1P78549 312 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 ROR1Q01973 937 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 TDGQ13569 410 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
BEST3-208ENST00000547208 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 RRAGBQ5VZM2 374 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 DYMQ7RTS9 669 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms