RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 ARL5CA6NH57 179 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 CYSRT1A8MQ03 144 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 AXIN1O15169 862 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ECI2O75521 394 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 BMP15O95972 392 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 C1RP00736 705 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 P4HBP07237 508 aaKnown RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ZNF806P0C7X5 589 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 CEBPBP17676 345 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 PRPHP41219 470 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 XKR3Q5GH77 459 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 HAUS3Q68CZ6 603 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ERMNQ8TAM6 284 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 SLC7A14Q8TBB6 771 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ZCCHC14Q8WYQ9 949 aaKnown RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 PGBD4Q96DM1 585 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 MCRS1Q96EZ8 462 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 GAD1Q99259 594 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 LMAN1LQ9HAT1 526 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 RGL1Q9NZL6 768 aa10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 MRPS17Q9Y2R5 130 aaKnown RBP10.89□□□□□ -0.67
R3HDM2-210ENST00000547019 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 F13A1P00488 732 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 HNRNPA1P09651 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 HOXA9P31269 272 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 ANP32AP39687 249 aaKnown RBP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 CXCL12P48061 93 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 CTTNQ14247 550 aaKnown RBP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 USP41Q3LFD5 358 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 PABPC1LQ4VXU2 614 aaKnown RBP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 SOWAHCQ53LP3 525 aaPredicted RBP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 PPM1LQ5SGD2 360 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 PLA2G4FQ68DD2 849 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 C4orf32Q8N8J7 132 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 DNASE1L2Q92874 299 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 SCNM1Q9BWG6 230 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 KANSL3Q9P2N6 904 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 ADAM28Q9UKQ2 775 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 IPPQ9Y573 584 aa10.88□□□□□ -0.67
R3HDM2-210ENST00000547019 MYO16Q9Y6X6 1858 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 KIAA1549LQ6ZVL6 1849 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 MAST4O15021 2626 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 VWA3AA6NCI4 1184 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 EPN2O95208 641 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 PAPSS2O95340 614 aaPredicted RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 RAP1GAPP47736 663 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 NOVA1P51513 510 aaKnown RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 PKP1Q13835 747 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 SF3A1Q15459 793 aaKnown RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 DTHD1Q6ZMT9 781 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 LONP2Q86WA8 852 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 MAP4K3Q8IVH8 894 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 TPH2Q8IWU9 490 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 C4orf19Q8IY42 314 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 C12orf50Q8NA57 414 aaPredicted RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 LNX1Q8TBB1 728 aaPredicted RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 FAM3CQ92520 227 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 TCEAL4Q96EI5 215 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 IER2Q9BTL4 223 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 ZSWIM4Q9H7M6 989 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 SUCLA2Q9P2R7 463 aaPredicted RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 LRWD1Q9UFC0 647 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 PIAS3Q9Y6X2 628 aa10.87□□□□□ -0.67
R3HDM2-210ENST00000547019 ASCC3Q8N3C0 2202 aaKnown RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 TMEM8BA6NDV4 472 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 DDX11L8A8MPP1 907 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 PP2D1A8MPX8 630 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 ARNTLO00327 626 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 FOXD2O60548 495 aaPredicted RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 MED24O75448 989 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 RHOP08100 348 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 IGFBP6P24592 240 aaPredicted RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 CCT6AP40227 531 aaKnown RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 CEBPZQ03701 1054 aaKnown RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 LIN9Q5TKA1 542 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 ARL6IP4Q66PJ3 421 aaKnown RBP10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 VITQ6UXI7 678 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 CEP68Q76N32 757 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
R3HDM2-210ENST00000547019 GPR65Q8IYL9 337 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms