RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CYP24A1Q07973 514 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 PSMD6Q15008 389 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 TCEAL5Q5H9L2 206 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 PLPP4Q5VZY2 271 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 RDH13Q8NBN7 331 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 MFSD14AQ96MC6 490 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 TSG101Q99816 390 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 GPR62Q9BZJ7 368 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 PDE11AQ9HCR9 933 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 CHST7Q9NS84 486 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 FRMD4BQ9Y2L6 1034 aa18.21■□□□□ 0.51
CCDC38-203ENST00000546803 FSD2A1L4K1 749 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 BIN1O00499 593 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 MAPK13O15264 365 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 CSPG5O95196 566 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 URODP06132 367 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 NR2F2P24468 414 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 MCM4P33991 863 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 WNT7BP56706 349 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
CCDC38-203ENST00000546803 DSG1Q02413 1049 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 CCDC85BQ15834 202 aaPredicted RBP18.2■□□□□ 0.5
CCDC38-203ENST00000546803 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 KIAA1841Q6NSI8 718 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 HASPINQ8TF76 798 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 FNBP1Q96RU3 617 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
CCDC38-203ENST00000546803 MRPL17Q9NRX2 175 aaKnown RBP18.2■□□□□ 0.5
CCDC38-203ENST00000546803 DPP3Q9NY33 737 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
CCDC38-203ENST00000546803 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 C2orf71A6NGG8 1288 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 TULP1O00294 542 aaPredicted RBP18.19■□□□□ 0.5
CCDC38-203ENST00000546803 BMP6P22004 513 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 CCNE1P24864 410 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 GLUD2P49448 558 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 LRRC63Q05C16 580 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 ADAM9Q13443 819 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 FAM171A1Q5VUB5 890 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 C9orf57Q5W0N0 161 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 FOXR2Q6PJQ5 311 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.19■□□□□ 0.5
CCDC38-203ENST00000546803 TAS1R1Q7RTX1 841 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 WDR49Q8IV35 697 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 TLE6Q9H808 572 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 INTS13Q9NVM9 706 aa18.19■□□□□ 0.5
CCDC38-203ENST00000546803 LAMA2P24043 3122 aaKnown RBP18.19■□□□□ 0.5
CCDC38-203ENST00000546803 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.18■□□□□ 0.5
CCDC38-203ENST00000546803 HIDE1A8MVS5 230 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 PIRO00625 290 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 CETN3O15182 167 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 LILRB3O75022 631 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 TMEM191BP0C7N4 346 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 HYAL1Q12794 435 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 SKIV2LQ15477 1246 aaKnown RBP18.18■□□□□ 0.5
CCDC38-203ENST00000546803 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 DUOXA2Q1HG44 320 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 KIAA0319Q5VV43 1072 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 CEP135Q66GS9 1140 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 PDXDC1Q6P996 788 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 USP37Q86T82 979 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 ANKRD36BP1Q96IX9 119 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC38-203ENST00000546803 ITGA11Q9UKX5 1188 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 PCDHGC5Q9Y5F6 944 aa18.18■□□□□ 0.5
CCDC38-203ENST00000546803 CHD9Q3L8U1 2897 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 PPP1R3GB7ZBB8 358 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 SYN3O14994 580 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 SLC34A2O95436 690 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 TNNC2P02585 160 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 DLATP10515 647 aaKnown RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 FGFR3P22607 806 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 IGFBP6P24592 240 aaPredicted RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 CA8P35219 290 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 PSMC2P35998 433 aaKnown RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 BRCC3P46736 316 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 AARSP49588 968 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 CASP4P49662 377 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 FKBP3Q00688 224 aaKnown RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 CREMQ03060 361 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 ENPEPQ07075 957 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 COL19A1Q14993 1142 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 DUSP6Q16828 381 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 ADGRD2Q7Z7M1 963 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 TMC2Q8TDI7 906 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 SUSD3Q96L08 255 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms