RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 ADALQ6DHV7 355 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 SLC8B1Q6J4K2 584 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
SSH1-204ENST00000546697 EPM2AIP1Q7L775 607 aaPredicted RBP16.69■□□□□ 0.26
SSH1-204ENST00000546697 RNF135Q8IUD6 432 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 CCDC65Q8IXS2 484 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 PDILTQ8N807 584 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 C18orf25Q96B23 403 aaPredicted RBP16.69■□□□□ 0.26
SSH1-204ENST00000546697 ZNF707Q96C28 371 aaPredicted RBP16.69■□□□□ 0.26
SSH1-204ENST00000546697 B3GALT6Q96L58 329 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 POMKQ9H5K3 350 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 MRPL44Q9H9J2 332 aaKnown RBP16.69■□□□□ 0.26
SSH1-204ENST00000546697 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
SSH1-204ENST00000546697 ANK1P16157 1881 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 M0QZQ0 153 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 GARTP22102 1010 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 CMA1P23946 247 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 SSTR3P32745 418 aaPredicted RBP16.68■□□□□ 0.26
SSH1-204ENST00000546697 CASP5P51878 434 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 PPP2R3AQ06190 1150 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 KCNA1Q09470 495 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 PSMD5Q16401 504 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 SEZ6Q53EL9 994 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 ZBTB41Q5SVQ8 909 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 ANKS3Q6ZW76 656 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 NT5DC4Q86YG4 428 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 HASPINQ8TF76 798 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
SSH1-204ENST00000546697 ACCSQ96QU6 501 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 MSTO1Q9BUK6 570 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 ZHX3Q9H4I2 956 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
SSH1-204ENST00000546697 PANK4Q9NVE7 773 aa16.68■□□□□ 0.26
SSH1-204ENST00000546697 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 ANO9A1A5B4 782 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 KIAA0391O15091 583 aaKnown RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 EIF3DO15371 548 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSH1-204ENST00000546697 XPOTO43592 962 aaKnown RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 ME1P48163 572 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 RARS2Q5T160 578 aaKnown RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 TMEM174Q8WUU8 243 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 FGFBP2Q9BYJ0 223 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 TMEM206Q9H813 350 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 TUBGCP4Q9UGJ1 667 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 AGO2Q9UKV8 859 aaKnown RBP16.67■□□□□ 0.26
SSH1-204ENST00000546697 NR2E1Q9Y466 385 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 ATP6V1DQ9Y5K8 247 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 C2orf16Q68DN1 1984 aa16.67■□□□□ 0.26
SSH1-204ENST00000546697 TISP43B9A030 160 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 ZMYND10O75800 440 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 ABLIM3O94929 683 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
SSH1-204ENST00000546697 SLFN14P0C7P3 912 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 CA8P35219 290 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 BRCC3P46736 316 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 KRT85P78386 507 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 UNC13DQ70J99 1090 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 KREMEN2Q8NCW0 462 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 ZNF507Q8TCN5 953 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 DHX58Q96C10 678 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 OXCT2Q9BYC2 517 aaPredicted RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 WDR6Q9NNW5 1121 aaKnown RBP16.66■□□□□ 0.26
SSH1-204ENST00000546697 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 USP25Q9UHP3 1055 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 KCNH3Q9ULD8 1083 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 MAFFQ9ULX9 164 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 UBE4BO95155 1302 aa16.66■□□□□ 0.26
SSH1-204ENST00000546697 PIRO00625 290 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 ADAM12O43184 909 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
SSH1-204ENST00000546697 OAZ2O95190 189 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 GCNT3O95395 438 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 LDHAP00338 332 aaKnown RBP16.65■□□□□ 0.26
SSH1-204ENST00000546697 MYL1P05976 194 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 MYBP10242 640 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 IDEP14735 1019 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 RPL17P18621 184 aaKnown RBP16.65■□□□□ 0.26
SSH1-204ENST00000546697 HOXD13P35453 343 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 SNRPFP62306 86 aaKnown RBP16.65■□□□□ 0.26
SSH1-204ENST00000546697 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 RSPO2Q6UXX9 243 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms