RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 VAMP7P51809 220 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 BCAR1P56945 870 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.41
LIMS2-217ENST00000545738 MYL5Q02045 173 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 TUSC3Q13454 348 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CDKAL1Q5VV42 579 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 LUZP1Q86V48 1076 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CD302Q8IX05 232 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 SLC35C1Q96A29 364 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 ELMO3Q96BJ8 720 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 CERS4Q9HA82 394 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 KANSL3Q9P2N6 904 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 MTUS1Q9ULD2 1270 aa17.64■□□□□ 0.41
LIMS2-217ENST00000545738 UPP1Q16831 310 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 TDRD10Q5VZ19 366 aaKnown RBP17.63■□□□□ 0.41
LIMS2-217ENST00000545738 INTS8Q75QN2 995 aaKnown RBP17.63■□□□□ 0.41
LIMS2-217ENST00000545738 GAS2L3Q86XJ1 694 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 WDR49Q8IV35 697 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 TRIM59Q8IWR1 403 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 COLGALT1Q8NBJ5 622 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 TMC2Q8TDI7 906 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 HASPINQ8TF76 798 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 VN1R3Q9BXE9 311 aa17.63■□□□□ 0.41
LIMS2-217ENST00000545738 PRG3Q9Y2Y8 225 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-217ENST00000545738 ATG2AQ2TAZ0 1938 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 NRP1O14786 923 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 KIF4AO95239 1232 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 ATP1A3P13637 1013 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 ZNF18P17022 549 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 TNNI1P19237 187 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 CBWD6Q4V339 395 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 CBWD3Q5JTY5 395 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 CBWD5Q5RIA9 395 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 KCNT2Q6UVM3 1135 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 FRMD5Q7Z6J6 570 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 THAP9Q9H5L6 903 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 ARMCX3Q9UH62 379 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-217ENST00000545738 UBQLN1Q9UMX0 589 aaKnown RBP17.62■□□□□ 0.41
LIMS2-217ENST00000545738 DERAQ9Y315 318 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 VWA8A3KMH1 1905 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
LIMS2-217ENST00000545738 VNN1O95497 513 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 CST3P01034 146 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 C4BPAP04003 597 aaKnown RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 LRPAP1P30533 357 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 OR1G1P47890 313 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 GCLMP48507 274 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 TIFAQ96CG3 184 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 FNBP1Q96RU3 617 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 MMRN2Q9H8L6 949 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 DPP3Q9NY33 737 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 ANO9A1A5B4 782 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 IKBKBO14920 756 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 SPTLC1O15269 473 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 ITGB3P05106 788 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 RAB30Q15771 203 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 C9orf57Q5W0N0 161 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 PPP2R2DQ66LE6 453 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 SV2AQ7L0J3 742 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 APTXQ7Z2E3 356 aaKnown RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-217ENST00000545738 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 SLC38A7Q9NVC3 462 aa17.61■□□□□ 0.41
LIMS2-217ENST00000545738 COL6A3P12111 3177 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 KCNJ18B7U540 433 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 PODXLO00592 558 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 PIRO00625 290 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 EFEMP2O95967 443 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 CYP3A5P20815 502 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 KCNJ12Q14500 433 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 TPD52L1Q16890 204 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-217ENST00000545738 ZACNQ401N2 412 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 EPC2Q52LR7 807 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
LIMS2-217ENST00000545738 CREBRFQ8IUR6 639 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 SLC39A11Q8N1S5 342 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 RSPH1Q8WYR4 309 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 FAM193BQ96PV7 902 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-217ENST00000545738 MSRAQ9UJ68 235 aa17.6■□□□□ 0.41
LIMS2-217ENST00000545738 I3L4J1 428 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 TMEM191BP0C7N4 346 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 KRT13P13646 458 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 POLR2BP30876 1174 aaKnown RBP17.59■□□□□ 0.41
LIMS2-217ENST00000545738 CTNNB1P35222 781 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 BMPR1AP36894 532 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 ERVK-21P61565 698 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 SURF1Q15526 300 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 DUOXA2Q1HG44 320 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 TCP11X2Q5H9J9 407 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 TCERG1LQ5VWI1 586 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
LIMS2-217ENST00000545738 KLHL23Q8NBE8 558 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms