RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DCCP43146 1447 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 UGP2Q16851 508 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-209ENST00000545689 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 GTF3C4Q9UKN8 822 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 PSTPIP1O43586 416 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 NR3C2P08235 984 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 HSD17B4P51659 736 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 E2F4Q16254 413 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 TMTC4Q5T4D3 741 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 CATSPER3Q86XQ3 398 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 RAPGEF5Q92565 580 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 EXT2Q93063 718 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 A0A0A6YYK5 440 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-209ENST00000545689 KITP10721 976 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 COMTP21964 271 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
COL4A6-209ENST00000545689 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 TPCN2Q8NHX9 752 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 MLXIPLQ9NP71 852 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 ZNF212Q9UDV6 495 aa13.19□□□□□ -0.3
COL4A6-209ENST00000545689 FGFR2P21802 821 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TMEM132DQ14C87 1099 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 KDM7AQ6ZMT4 941 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 MRPL46Q9H2W6 279 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 PLEKHA5Q9HAU0 1116 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 KRT82Q9NSB4 513 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 H0Y3Z8 333 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 KCNN4O15554 427 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 EEF1DP29692 281 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 LSP1P33241 339 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 MMP14P50281 582 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ICA1LQ8NDH6 482 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 CPA5Q8WXQ8 436 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 OSBPL8Q9BZF1 889 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TMEM117Q9H0C3 514 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TMEM247A6NEH6 219 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TMCC1O94876 653 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 CD4P01730 458 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 CDKAL1Q5VV42 579 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 SERPINB12Q96P63 405 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ALG6Q9Y672 507 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ARHGEF28Q8N1W1 1705 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 SLC25A27O95847 323 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 RALAP11233 206 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 SULT1E1P49888 294 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ACTR2P61160 394 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 HIC1Q14526 733 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 WDR72Q3MJ13 1102 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 KAZALD1Q96I82 304 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TSSK1BQ9BXA7 367 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 MTO1Q9Y2Z2 717 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 RAD23BP54727 409 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 HMGCS2P54868 508 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 PRKCEQ02156 737 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 IER5Q5VY09 327 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 CCNYL1Q8N7R7 359 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 TSPAN17Q96FV3 270 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 DDX50Q9BQ39 737 aaKnown RBP13.18□□□□□ -0.3
COL4A6-209ENST00000545689 NIF3L1Q9GZT8 377 aa13.18□□□□□ -0.3
COL4A6-209ENST00000545689 ARHGAP10A1A4S6 786 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 FAM107AO95990 144 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 KLRC1P26715 233 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 TPI1P60174 286 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 ERVK-24P63145 666 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 Q4G0T1 1027 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 BTBD8Q5XKL5 378 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SLC13A1Q9BZW2 595 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 EHD4Q9H223 541 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
COL4A6-209ENST00000545689 PRAMEP78395 509 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 NME3Q13232 169 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 STAMBPL1Q96FJ0 436 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 KLK7P49862 253 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 GRIN1Q05586 938 aa13.17□□□□□ -0.3
COL4A6-209ENST00000545689 SEC23AQ15436 765 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms