RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ANKRD20A2Q5SQ80 823 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ANKRD20A1Q5TYW2 823 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 STRIP1Q5VSL9 837 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ANKRD20A3Q5VUR7 823 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ERICH1Q86X53 443 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 CYP4X1Q8N118 509 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SH3TC2Q8TF17 1288 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 MAML1Q92585 1016 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 SMG5Q9UPR3 1016 aaKnown RBP9.31□□□□□ -0.92
TDP1-204ENST00000545686 SIP14410 1827 aa9.31□□□□□ -0.92
TDP1-204ENST00000545686 RASA4BC9J798 803 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RASA4O43374 803 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 ASMTLO95671 621 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 NPR1P16066 1061 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 FOXN2P32314 431 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RASA2Q15283 850 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 IZUMO3Q5VZ72 239 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 TRABD2AQ86V40 505 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 KATNAL2Q8IYT4 538 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 MCOLN2Q8IZK6 566 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 TEX9Q8N6V9 391 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 PARD3BQ8TEW8 1205 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 ATG4AQ8WYN0 398 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 MLXIPLQ9NP71 852 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 HERC5Q9UII4 1024 aaKnown RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 STK38LQ9Y2H1 464 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 LTBP4Q8N2S1 1624 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 NFASCO94856 1347 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 A8MUI8 341 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 HNRNPCL1O60812 293 aaKnown RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 SMNDC1O75940 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
TDP1-204ENST00000545686 PROSCO94903 275 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 CETPP11597 493 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RRM1P23921 792 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 KLRC2P26717 231 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 ALDH3A1P30838 453 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 QARSP47897 775 aaKnown RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 RASSF2P50749 326 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 IRX1P78414 480 aaPredicted RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 MOGSQ13724 837 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 BLMHQ13867 455 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 SPARCL1Q14515 664 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 AOC3Q16853 763 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RHOT1Q8IXI2 618 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 MFSD14AQ96MC6 490 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 FBXL18Q96ME1 805 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RNPEPL1Q9HAU8 725 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 ACP6Q9NPH0 428 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 RAB20Q9NX57 234 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 CORO1CQ9ULV4 474 aaPredicted RBP9.3□□□□□ -0.92
TDP1-204ENST00000545686 ZHX2Q9Y6X8 837 aa9.3□□□□□ -0.92
TDP1-204ENST00000545686 UMODL1Q5DID0 1318 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 CCDC189A1A4V9 331 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TRAFD1O14545 582 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ABLIM1O14639 778 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 CLGNO14967 610 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 NEBLO76041 1014 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 MAGEA4P43358 317 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 HSD17B4P51659 736 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 BPIFB4P59827 614 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 UBXN2AP68543 259 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 JAG1P78504 1218 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TMED2Q15363 201 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 PDK4Q16654 411 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 DRICH1Q6PGQ1 229 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ANKS1BQ7Z6G8 1248 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 CBWD2Q8IUF1 395 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 MAP4K3Q8IVH8 894 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 ZSWIM2Q8NEG5 633 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 EXD1Q8NHP7 514 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 DENND1AQ8TEH3 1009 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 LRRC37BQ96QE4 947 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 HERPUD2Q9BSE4 406 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 TMX4Q9H1E5 349 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 KIAA1217Q5T5P2 1943 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 EXOC1LA0A1B0GW35 172 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 GSTTP1A0A1W2PQM5 241 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 KIF3CO14782 793 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 PPP1R12AO14974 1030 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 RALAP11233 206 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 ADSSP30520 456 aa9.29□□□□□ -0.92
TDP1-204ENST00000545686 RBM5P52756 815 aaKnown RBP eCLIP9.29□□□□□ -0.92
TDP1-204ENST00000545686 TRIP13Q15645 432 aaPredicted RBP9.29□□□□□ -0.92
TDP1-204ENST00000545686 WASHC2DQ5SRD0 308 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms