RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 EMC2Q15006 297 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PCBP1Q15365 356 aaKnown RBP eCLIP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 EPHA7Q15375 998 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 HIF1AQ16665 826 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 XKR9Q5GH70 373 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 C6orf118Q5T5N4 469 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PPP4R3AQ6IN85 833 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ALKBH2Q6NS38 261 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CPLX2Q6PUV4 134 aaKnown RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 SPATA31D4Q6ZUB0 917 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 RUFY3Q7L099 469 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 OTUD6AQ7L8S5 288 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ERMP1Q7Z2K6 904 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 LYSMD3Q7Z3D4 306 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 NEK8Q86SG6 692 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 FERMT3Q86UX7 667 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PALB2Q86YC2 1186 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 C4orf19Q8IY42 314 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 RNF168Q8IYW5 571 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ALDH16A1Q8IZ83 802 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 HDAC7Q8WUI4 952 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 SMG7Q92540 1137 aaKnown RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 HAS1Q92839 578 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 NXPE3Q969Y0 559 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ZNF707Q96C28 371 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CCDC51Q96ER9 411 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ZNF274Q96GC6 653 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CPB2Q96IY4 423 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 B3GALT6Q96L58 329 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ZFP42Q96MM3 310 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 MYADMQ96S97 322 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 LXNQ9BS40 222 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PHF20Q9BVI0 1012 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 COLEC11Q9BWP8 271 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 EIF2AQ9BY44 585 aaKnown RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 ZSWIM4Q9H7M6 989 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PIDD1Q9HB75 910 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 XPNPEP1Q9NQW7 623 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CHST7Q9NS84 486 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 MIOSQ9NXC5 875 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 RGL1Q9NZL6 768 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 EPS15L1Q9UBC2 864 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CA14Q9ULX7 337 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 KCNJ14Q9UNX9 436 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 HES2Q9Y543 173 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 GPC6Q9Y625 555 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 CYP46A1Q9Y6A2 500 aa4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 DNMT3AQ9Y6K1 912 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 PTPRZ1P23471 2315 aaPredicted RBP4.04□□□□□ -1.76
LPCAT3-212ENST00000545459 TDRD15B5MCY1 1934 aaKnown RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 ARID2Q68CP9 1835 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 TTLL8A6PVC2 850 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 ANHXE9PGG2 379 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 B4GALT5O43286 388 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 TGM5O43548 720 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 MARCH6O60337 910 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CDKL5O76039 1030 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 SLITRK3O94933 977 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 LYPLA2O95372 231 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 BAG4O95429 457 aaKnown RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 LMNAP02545 664 aaKnown RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 XBP1P17861 261 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 ARF4P18085 180 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 RPL17P18621 184 aaKnown RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 AKAP5P24588 427 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CTSOP43234 321 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CYP4A11Q02928 519 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CREMQ03060 361 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 MBTD1Q05BQ5 628 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 POU5F1BQ06416 359 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 SPIRE1Q08AE8 756 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 ZNF211Q13398 564 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 HTR4Q13639 388 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CAPSQ13938 189 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 TFDP1Q14186 410 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CTTNQ14247 550 aaKnown RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 C11orf91Q3C1V1 193 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 USP41Q3LFD5 358 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 C4orf17Q53FE4 359 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 SPECC1Q5M775 1068 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 COX20Q5RI15 118 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 NCAPH2Q6IBW4 605 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 FUT10Q6P4F1 479 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 NOTUMQ6P988 496 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 LILRA6Q6PI73 481 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 PRSS55Q6UWB4 352 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CAPN12Q6ZSI9 719 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 PIK3AP1Q6ZUJ8 805 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 GET4Q7L5D6 327 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 CDR2LQ86X02 465 aaPredicted RBP4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 TPH2Q8IWU9 490 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 GPR65Q8IYL9 337 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 SLFN12Q8IYM2 578 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 HACE1Q8IYU2 909 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 ZNF295-AS1Q8N0V1 137 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 GSTCDQ8NEC7 633 aa4.03□□□□□ -1.76
LPCAT3-212ENST00000545459 KCNG4Q8TDN1 519 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms