RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 CBWD6Q4V339 395 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 CBWD3Q5JTY5 395 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 CBWD5Q5RIA9 395 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 ODR4Q5SWX8 454 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 UBL4BQ8N7F7 174 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 KRT35Q92764 455 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 IKZF4Q9H2S9 585 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 GABBR1Q9UBS5 961 aa20.09■□□□□ 0.81
MSLN-202ENST00000545450 ZNF862O60290 1169 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 UBOX5O94941 541 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 PGK2P07205 417 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 RPSAP08865 295 aaKnown RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 NQO1P15559 274 aaKnown RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 FGFR4P22455 802 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 SEPT14Q6ZU15 432 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.08■□□□□ 0.81
MSLN-202ENST00000545450 ZNF720Q7Z2F6 126 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 KSR1Q8IVT5 923 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 FAM178BQ8IXR5 827 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 ART4Q93070 314 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 RSRC1Q96IZ7 334 aaKnown RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 MS4A4AQ96JQ5 239 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 ZSWIM1Q9BR11 485 aa20.08■□□□□ 0.81
MSLN-202ENST00000545450 ROPN1BQ9BZX4 212 aaPredicted RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 ROPN1Q9HAT0 212 aaPredicted RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 USP15Q9Y4E8 981 aaPredicted RBP20.08■□□□□ 0.81
MSLN-202ENST00000545450 UNCXA6NJT0 531 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 ACTR2P61160 394 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 NCALDP61601 193 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 CYP1B1Q16678 543 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 CCDC137Q6PK04 289 aaKnown RBP20.08■□□□□ 0.8
MSLN-202ENST00000545450 ANO5Q75V66 913 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 EXOC3L1Q86VI1 746 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 UHMK1Q8TAS1 419 aaKnown RBP20.08■□□□□ 0.8
MSLN-202ENST00000545450 FGD4Q96M96 766 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 RUNDC3BQ96NL0 473 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 AGPAT1Q99943 283 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 HOMER3Q9NSC5 361 aa20.08■□□□□ 0.8
MSLN-202ENST00000545450 PEX5P50542 639 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 CCDC60Q8IWA6 550 aaPredicted RBP20.07■□□□□ 0.8
MSLN-202ENST00000545450 NSMCE1Q8WV22 266 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 FAXDC2Q96IV6 333 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 RPS6KC1Q96S38 1066 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 GBA2Q9HCG7 927 aaPredicted RBP20.07■□□□□ 0.8
MSLN-202ENST00000545450 SEPT11Q9NVA2 429 aaKnown RBP20.07■□□□□ 0.8
MSLN-202ENST00000545450 DMAC2Q9NW81 257 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 C15orf41Q9Y2V0 281 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 FOXN3O00409 490 aaPredicted RBP20.07■□□□□ 0.8
MSLN-202ENST00000545450 STBD1O95210 358 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 ANP32DO95626 131 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 MARCKSL1P49006 195 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 PPP2R5AQ15172 486 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 SWSAP1Q6NVH7 229 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 ABHD15Q6UXT9 468 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 CYFIP1Q7L576 1253 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 AGAP11Q8TF27 550 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
MSLN-202ENST00000545450 PSAPP07602 524 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 KCNJ2P63252 427 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 MYO1EQ12965 1108 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 XKR9Q5GH70 373 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 PHLDB3Q6NSJ2 640 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 GBP7Q8N8V2 638 aaPredicted RBP20.06■□□□□ 0.8
MSLN-202ENST00000545450 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
MSLN-202ENST00000545450 CTTNBP2NLQ9P2B4 639 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 L3MBTL1Q9Y468 752 aa20.06■□□□□ 0.8
MSLN-202ENST00000545450 FTLP02792 175 aaPredicted RBP20.05■□□□□ 0.8
MSLN-202ENST00000545450 BNIP1Q12981 228 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 ARHGAP44Q17R89 818 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 TRMT10CQ7L0Y3 403 aaKnown RBP20.05■□□□□ 0.8
MSLN-202ENST00000545450 MMP19Q99542 508 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 STRA6Q9BX79 667 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 PORCNQ9H237 461 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 ECT2Q9H8V3 914 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 GPRC5CQ9NQ84 441 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 PNMA3Q9UL41 463 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 DNAJC25-GNG10A0A024R161 153 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 ANKRD63C9JTQ0 380 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 CELF2O95319 508 aaKnown RBP20.05■□□□□ 0.8
MSLN-202ENST00000545450 UBA1P22314 1058 aaKnown RBP20.05■□□□□ 0.8
MSLN-202ENST00000545450 RFX1P22670 979 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 COILP38432 576 aaPredicted RBP20.05■□□□□ 0.8
MSLN-202ENST00000545450 FKBP1BP68106 108 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 CCDC38Q502W7 563 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 WDR78Q5VTH9 848 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 LMO3Q8TAP4 145 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 ATP6V0A1Q93050 837 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 CCDC113Q9H0I3 377 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 BATF3Q9NR55 127 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 UBE4BO95155 1302 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 PLXNB2O15031 1838 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
MSLN-202ENST00000545450 CCL15-CCL14A0A0B4J2E2 113 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 FAM170AA1A519 330 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 PDHXO00330 501 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 SOCS7O14512 581 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 SUN1O94901 812 aa20.04■□□□□ 0.8
MSLN-202ENST00000545450 TRIM49P0CI25 452 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms