RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PPIP5K1Q6PFW1 1433 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TUBA1AQ71U36 451 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SKA1Q96BD8 255 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 KLHL32Q96NJ5 620 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SYCP2Q9BX26 1530 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MAST3O60307 1309 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 E2F8A0AVK6 867 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TK2O00142 265 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TBC1D12O60347 775 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MYL2P10916 166 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 RFC4P35249 363 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SCARA5Q6ZMJ2 495 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MTDHQ86UE4 582 aaKnown RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 DPF2Q92785 391 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MAP4K1Q92918 833 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 WNK4Q96J92 1243 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TTLL13PA6NNM8 815 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 KRT36O76013 467 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 LDHAP00338 332 aaKnown RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TALDO1P37837 337 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MXI1P50539 228 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 RALGDSQ12967 914 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 RASSF6Q6ZTQ3 369 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 FAM45AQ8TCE6 357 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 E2F7Q96AV8 911 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SENP7Q9BQF6 1050 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF222Q9UK12 451 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TRIM49D1C9J1S8 452 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 MYO1DO94832 1006 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TTLL1O95922 423 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PAX3P23760 479 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 EXOSC10Q01780 885 aaKnown RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 SLC10A5Q5PT55 438 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PRUNE1Q86TP1 453 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 RDM1Q8NG50 284 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 KIFC1Q9BW19 673 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 CHKBQ9Y259 395 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PEX1O43933 1283 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 FGAP02671 866 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 ETS2P15036 469 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 LRRC74AQ0VAA2 488 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TUBA3EQ6PEY2 450 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 C1orf228Q6PIY5 440 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PPP4R3CPQ6ZMV5 832 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 C16orf62Q7Z3J2 963 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TGFBRAP1Q8WUH2 860 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 PHF23Q9BUL5 403 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-216ENST00000545170 TAGLN3Q9UI15 199 aa9.04□□□□□ -0.96
ATXN3-216ENST00000545170 A8MXQ7 604 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 FOXP2O15409 715 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 FAM20BO75063 409 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 IL6P05231 212 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 PWP1Q13610 501 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 TUBA3CQ13748 450 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 MXD4Q14582 209 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 C6orf10Q5SRN2 563 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 LRRC6Q86X45 466 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 TMEM237Q96Q45 408 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 RBM15Q96T37 977 aaKnown RBP eCLIP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 TRNAU1APQ9NX07 287 aaKnown RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 ADAM22Q9P0K1 906 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 BTBD3Q9Y2F9 522 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 WBP11Q9Y2W2 641 aaKnown RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 INSRP06213 1382 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 MYO3BQ8WXR4 1341 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 PNMA8CA0A1B0GUJ8 204 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 FLT3P36888 993 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 DGKKQ5KSL6 1271 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 ZBTB49Q6ZSB9 765 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 KBTBD2Q8IY47 623 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 RIBC1Q8N443 379 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 JADE3Q92613 823 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 ITFG2Q969R8 447 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 RMDN1Q96DB5 314 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 HES6Q96HZ4 224 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF184Q99676 751 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 EGFL8Q99944 293 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-216ENST00000545170 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 USP19O94966 1318 aa9.03□□□□□ -0.96
ATXN3-216ENST00000545170 E5RI56 91 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms