RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 GGT7Q9UJ14 662 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 RALAP11233 206 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 GPRC5CQ9NQ84 441 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 RAB6BQ9NRW1 208 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
CHD4-211ENST00000544484 CYP2C9P11712 490 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 NAB2Q15742 525 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 FSCBQ5H9T9 825 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 PPP1R36Q96LQ0 422 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 TRPC7Q9HCX4 862 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 FGFR1OP2Q9NVK5 253 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 ASAP2O43150 1006 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 GYS1P13807 737 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 KCNA1Q09470 495 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 CAPRIN1Q14444 709 aaKnown RBP13.5□□□□□ -0.25
CHD4-211ENST00000544484 MORF4L2Q15014 288 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 MAP3K14Q99558 947 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 COMTP21964 271 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 KCNJ1P48048 391 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 RFX8Q6ZV50 586 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 RCOR2Q8IZ40 523 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 PARK7Q99497 189 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 SLC13A4Q9UKG4 626 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 CFAP69A5D8W1 941 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 ANP32DO95626 131 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 ERFP50548 548 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 ESRRGP62508 458 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 SLC15A2Q16348 729 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 HSP90AA5PQ58FG0 334 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 TRIM4Q9C037 500 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 MAP3K20Q9NYL2 800 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 MAGEB2O15479 319 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 KLRC1P26715 233 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 GTF2H1P32780 548 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 HUNKP57058 714 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 OR2W6PQ8NHA6 318 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 CLMNQ96JQ2 1002 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 KCNH4Q9UQ05 1017 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 LONRF1Q17RB8 773 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 ADGRA1Q86SQ6 560 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
CHD4-211ENST00000544484 RBM15Q96T37 977 aaKnown RBP eCLIP13.49□□□□□ -0.254e-7■■■■□ 23.8
CHD4-211ENST00000544484 XAB2Q9HCS7 855 aaKnown RBP13.49□□□□□ -0.25
CHD4-211ENST00000544484 COL23A1Q86Y22 540 aaPredicted RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 SCFD2Q8WU76 684 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 RIN2Q8WYP3 895 aaPredicted RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 IGSF9BQ9UPX0 1349 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 MED24O75448 989 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 RFC5P40937 340 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 GRB10Q13322 594 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 PCDHB2Q9Y5E7 798 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 DDX42Q86XP3 938 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHD4-211ENST00000544484 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 CELF4Q9BZC1 486 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 TARSL2A2RTX5 802 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 MYO1CO00159 1063 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 PHF2O75151 1096 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 INPP1P49441 399 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 CYP4A22Q5TCH4 519 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 IER5Q5VY09 327 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 ETNK1Q9HBU6 452 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 ARL8AQ96BM9 186 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 ACSF2Q96CM8 615 aaPredicted RBP13.48□□□□□ -0.25
CHD4-211ENST00000544484 NT5C1AQ9BXI3 368 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 DRC3Q9H069 523 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 ALG6Q9Y672 507 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 PITPNM2Q9BZ72 1349 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 EIF3DO15371 548 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■□□□ 11.7
CHD4-211ENST00000544484 DNAJC6O75061 913 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 SLC25A27O95847 323 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 CYP11B2P19099 503 aa13.48□□□□□ -0.25
CHD4-211ENST00000544484 CAP2P40123 477 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms