RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 EMC10Q5UCC4 262 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 TTC27Q6P3X3 843 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 EEPD1Q7L9B9 569 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 OR2W6PQ8NHA6 318 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 EIF3HO15372 352 aaKnown RBP eCLIP14.87□□□□□ -0.032e-8■■■■■ 41.3
MSH2-206ENST00000543555 CYP1A1P04798 512 aaPredicted RBP14.87□□□□□ -0.03
MSH2-206ENST00000543555 MYBL1P10243 752 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 MAPK4P31152 587 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 ZNF844Q08AG5 666 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 LY6KQ17RY6 165 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 EFCAB13Q8IY85 973 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 ANKRD13AQ8IZ07 590 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 CPA5Q8WXQ8 436 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 TRIM11Q96F44 468 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 MTUS1Q9ULD2 1270 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 TCRBV7S2A1N4TA0A589 114 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 A6NNZ2 444 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 CNMDO75829 334 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 MYZAPP0CAP1 466 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 RRM1P23921 792 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 CENPCQ03188 943 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 TUBB8Q3ZCM7 444 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 CCDC137Q6PK04 289 aaKnown RBP14.87□□□□□ -0.03
MSH2-206ENST00000543555 ZPBP2Q6X784 338 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 SLC10A4Q96EP9 437 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 TXLNGYQ9BZA5 131 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
MSH2-206ENST00000543555 R3HDMLQ9H3Y0 253 aa14.87□□□□□ -0.03
MSH2-206ENST00000543555 MROH7Q68CQ1 1323 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 PPFIA2O75334 1257 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 HARSP12081 509 aaKnown RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 NR1D1P20393 614 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 NSFP46459 744 aaKnown RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 ATP1A2P50993 1020 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 OR5B17Q8NGF7 314 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 PRPF31Q8WWY3 499 aaKnown RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 FAM167AQ96KS9 214 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 PCDHB4Q9Y5E5 795 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 PODXLO00592 558 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 CLTAP09496 248 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 SEZ6Q53EL9 994 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 SPDYCQ5MJ68 293 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 TTC19Q6DKK2 380 aaPredicted RBP14.86□□□□□ -0.03
MSH2-206ENST00000543555 ARMC9Q7Z3E5 817 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 CYFIP2Q96F07 1278 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 AZI2Q9H6S1 392 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 PPME1Q9Y570 386 aa14.86□□□□□ -0.03
MSH2-206ENST00000543555 CLDN3O15551 220 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ERLIN2O94905 339 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ARIH2O95376 493 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ITGBL1O95965 494 aaPredicted RBP14.85□□□□□ -0.03
MSH2-206ENST00000543555 RARAP10276 462 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 TBXAS1P24557 533 aaPredicted RBP14.85□□□□□ -0.03
MSH2-206ENST00000543555 TMEM270Q6UE05 265 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ZDHHC24Q6UX98 284 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 MON1BQ7L1V2 547 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 BRSK2Q8IWQ3 736 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 TRIM7Q9C029 511 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 GBA2Q9HCG7 927 aaPredicted RBP14.85□□□□□ -0.03
MSH2-206ENST00000543555 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 TTLL13PA6NNM8 815 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 MYO1FO00160 1098 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 GNA15P30679 374 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
MSH2-206ENST00000543555 EFNA5P52803 228 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 PDCLQ13371 301 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 NCOA4Q13772 614 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 RUFY4Q6ZNE9 571 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ERO1BQ86YB8 467 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 RUNDC3BQ96NL0 473 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 PLVAPQ9BX97 442 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 CCDC113Q9H0I3 377 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 GRHL1Q9NZI5 618 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 CNTN6Q9UQ52 1028 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 UMODL1Q5DID0 1318 aa14.85□□□□□ -0.03
MSH2-206ENST00000543555 CXCL11O14625 94 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 MSCO60682 206 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 SLC25A27O95847 323 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 MARK3P27448 753 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 GBP1P32455 592 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 PLTPP55058 493 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 IER5Q5VY09 327 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 C12orf50Q8NA57 414 aaPredicted RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 FGD4Q96M96 766 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 GPR20Q99678 358 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 MRPL4Q9BYD3 311 aaKnown RBP14.84□□□□□ -0.03
MSH2-206ENST00000543555 CENPHQ9H3R5 247 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 SCN4AP35499 1836 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 FAM189A1O60320 539 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 PGK2P07205 417 aa14.84□□□□□ -0.03
MSH2-206ENST00000543555 SLC1A1P43005 524 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms