RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 KIF4AO95239 1232 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 DNAJB1P25685 340 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 PAK1Q13153 545 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 CAMK1Q14012 370 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 PTPROQ16827 1216 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 TTI2Q6NXR4 508 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 ZC3H3Q8IXZ2 948 aaKnown RBP18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 MYLIPQ8WY64 445 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 STK39Q9UEW8 545 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 ADAM28Q9UKQ2 775 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 CTNND2Q9UQB3 1225 aa18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 COL4A4P53420 1690 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-203ENST00000543002 PLXNA4Q9HCM2 1894 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 TULP1O00294 542 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 TADA2AO75478 443 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 AKAP3O75969 853 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 B3GAT3O94766 335 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 EFEMP2O95967 443 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 PSMC2P35998 433 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 GUCY2FP51841 1108 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 TFAMQ00059 246 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 CAVIN1Q6NZI2 390 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 WDR49Q8IV35 697 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 CACTINQ8WUQ7 758 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 MRPL38Q96DV4 380 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 FNBP1Q96RU3 617 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 MKNK1Q9BUB5 465 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 VN1R3Q9BXE9 311 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 SZT2Q5T011 3432 aa18.52■□□□□ 0.56
RABGGTA-203ENST00000543002 IGFBP6P24592 240 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 STX17P56962 302 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 DPCR1Q3MIW9 517 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 FUT10Q6P4F1 479 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 CD300LGQ6UXG3 332 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 RNF168Q8IYW5 571 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 TMEM130Q8N3G9 435 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 C3orf58Q8NDZ4 430 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 PLEKHO2Q8TD55 490 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 TMC2Q8TDI7 906 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 PARD3BQ8TEW8 1205 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 CCDC127Q96BQ5 260 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 CGRRF1Q99675 332 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 DUSP9Q99956 384 aaKnown RBP18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 GZF1Q9H116 711 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 TLR9Q9NR96 1032 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 INTS13Q9NVM9 706 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 DPP3Q9NY33 737 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 RWDD2AQ9UIY3 292 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 MTCH2Q9Y6C9 303 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 PTPRJQ12913 1337 aa18.51■□□□□ 0.55
RABGGTA-203ENST00000543002 ANO9A1A5B4 782 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 TMEM191BP0C7N4 346 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 DLATP10515 647 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 IGFBP4P22692 258 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 ERVFC1P60507 584 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 DUOXA2Q1HG44 320 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 SKOR2Q2VWA4 1001 aaPredicted RBP18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 PDE12Q6L8Q7 609 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 SASS6Q6UVJ0 657 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 INTS8Q75QN2 995 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 FAM186BQ8IYM0 893 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 OR5B17Q8NGF7 314 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 HASPINQ8TF76 798 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 EEF2KMTQ96G04 330 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 ANKRD36BP1Q96IX9 119 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 GPR62Q9BZJ7 368 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 DACH1Q9UI36 760 aa18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 SF3B1O75533 1304 aaKnown RBP eCLIP18.5■□□□□ 0.55
RABGGTA-203ENST00000543002 PIRO00625 290 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 FSCN2O14926 492 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 SOD2P04179 222 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 EPB41P11171 864 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 FOSL2P15408 326 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TNNI1P19237 187 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 IRS1P35568 1242 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 MCCD1P59942 119 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CLDN10P78369 228 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ENPEPQ07075 957 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ELAVL2Q12926 359 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 C9orf57Q5W0N0 161 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 LMBRD2Q68DH5 695 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 C1orf127Q8N9H9 656 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 BORCS6Q96GS4 357 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CEP63Q96MT8 703 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TCF25Q9BQ70 676 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 HERC2P3Q9BVR0 1158 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 MTMR12Q9C0I1 747 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 ZBP1Q9H171 429 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 NGRNQ9NPE2 291 aaKnown RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 LRRIQ3A6PVS8 624 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 PPEF2O14830 753 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TRAPPC3O43617 180 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 TNNC2P02585 160 aa18.49■□□□□ 0.55
RABGGTA-203ENST00000543002 CTSAP10619 480 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms