RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GRIK3Q13003 919 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 TMEM132DQ14C87 1099 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 KRT31Q15323 416 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 UPP1Q16831 310 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 ZACNQ401N2 412 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 SV2AQ7L0J3 742 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 WDR49Q8IV35 697 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 RABGGTAQ92696 567 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 MTIF3Q9H2K0 278 aaKnown RBP11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 MARCH5Q9NX47 278 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 INSL6Q9Y581 213 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 GBF1Q92538 1859 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 LINC01553A4QN01 128 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 CASTOR2A6NHX0 329 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 KCNJ18B7U540 433 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 SPTLC1O15269 473 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 PMM2O15305 246 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 TLL1O43897 1013 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 GALTP07902 379 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 EEF1GP26641 437 aaKnown RBP11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 GCLMP48507 274 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 SLC11A1P49279 550 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 CLCNKBP51801 687 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 TUSC3Q13454 348 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 KCNJ12Q14500 433 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 TRAPPC11Q7Z392 1133 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 NT5DC4Q86YG4 428 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 LRRC43Q8N309 656 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 RSPH1Q8WYR4 309 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 ELMO3Q96BJ8 720 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 TSPAN18Q96SJ8 248 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 YME1L1Q96TA2 773 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 METTL14Q9HCE5 456 aaKnown RBP11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 DPP3Q9NY33 737 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 KANSL3Q9P2N6 904 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 PCDHA11Q9Y5I1 949 aa11.55□□□□□ -0.56
NPIPB3-210ENST00000542817 SCN1AP35498 2009 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 CA3P07451 260 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 GTF2H1P32780 548 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 CLCN1P35523 988 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 AARSP49588 968 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 TFAMQ00059 246 aaKnown RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 TAP1Q03518 808 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 KCNH2Q12809 1159 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 BTG3Q14201 252 aaPredicted RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 SURF1Q15526 300 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 LRIT3Q3SXY7 679 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 CCDC40Q4G0X9 1142 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 PRPF38BQ5VTL8 546 aaKnown RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 ABI1Q8IZP0 508 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 URGCPQ8TCY9 931 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 KIAA1671Q9BY89 1806 aa11.54□□□□□ -0.56
NPIPB3-210ENST00000542817 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 NT5C1B-RDH14C9J2C7 533 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 SOX1O00570 391 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 NRP1O14786 923 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 KIF4AO95239 1232 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 TNNI1P19237 187 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 FMO5P49326 533 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 BCAR1P56945 870 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 MAN2A1Q16706 1144 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 EPC2Q52LR7 807 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 DCAF17Q5H9S7 520 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 LIMS2Q7Z4I7 341 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 FNBP1Q96RU3 617 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 C17orf80Q9BSJ5 609 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 MRPL9Q9BYD2 267 aaKnown RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 TMEM8AQ9HCN3 771 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 SLC38A7Q9NVC3 462 aa11.53□□□□□ -0.56
NPIPB3-210ENST00000542817 EPOPA6NHQ4 379 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms