RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 IMPACTQ9P2X3 320 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 SIK3Q9Y2K2 1263 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 COQ4Q9Y3A0 265 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 NR2E3Q9Y5X4 410 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 WDR81Q562E7 1941 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 PTGESO14684 152 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZC3H11AO75152 810 aaKnown RBP eCLIP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 BAIAP3O94812 1187 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 CST3P01034 146 aaPredicted RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 POMCP01189 267 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 AMHP03971 560 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 PTMAP06454 111 aaKnown RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 SYN1P17600 705 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 ATICP31939 592 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 SCNN1GP51170 649 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 LRMPQ12912 555 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 TRIM14Q14142 442 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 NOMO2Q5JPE7 1267 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 CACNA2D4Q7Z3S7 1137 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 C1orf127Q8N9H9 656 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZNF397Q8NF99 534 aaPredicted RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 RSPH1Q8WYR4 309 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 TAF4BQ92750 862 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 SEMA4DQ92854 862 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 C18orf25Q96B23 403 aaPredicted RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 VWCEQ96DN2 955 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 FAM81BQ96LP2 452 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 NT5C1BQ96P26 610 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 PPP1R10Q96QC0 940 aaKnown RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 EDEM3Q9BZQ6 932 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 CXCL16Q9H2A7 254 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 APEX2Q9UBZ4 518 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 TUBGCP4Q9UGJ1 667 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 ITGA11Q9UKX5 1188 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZMYND8Q9ULU4 1186 aaPredicted RBP8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 AGAP1Q9UPQ3 857 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 DAAM1Q9Y4D1 1078 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 FRMPD3Q5JV73 1810 aa8.65□□□□□ -1.02
MRPL40P1-201ENST00000542687 AKR1B15C9JRZ8 316 aaPredicted RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 INPPL1O15357 1258 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 UPP2O95045 317 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 VNN1O95497 513 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 ITGB3P05106 788 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 FGFR1P11362 822 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 P4HA1P13674 534 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 UCHL3P15374 230 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 RFX1P22670 979 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 POLR2BP30876 1174 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 RPL9P32969 192 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 KCNJ6P48051 423 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 GUCY2FP51841 1108 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 MYL6P60660 151 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 RNASELQ05823 741 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 MYO1EQ12965 1108 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 GRIK3Q13003 919 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 TBX2Q13207 712 aaPredicted RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 ZNF699Q32M78 642 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 FIGNQ5HY92 759 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 CLLU1OSQ5K130 101 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 PSRC1Q6PGN9 363 aaPredicted RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 ZNF365Q70YC5 407 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 OTOP2Q7RTS6 562 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 GSTCDQ8NEC7 633 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 LMO3Q8TAP4 145 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 HPDLQ96IR7 371 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 PDLIM2Q96JY6 352 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 CASD1Q96PB1 797 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 FAM193BQ96PV7 902 aaPredicted RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 PPP1R9BQ96SB3 815 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 PI4K2AQ9BTU6 479 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 MRPL9Q9BYD2 267 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 UBE2TQ9NPD8 197 aaPredicted RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 MIOSQ9NXC5 875 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 SIX4Q9UIU6 781 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 LUC7L2Q9Y383 392 aaKnown RBP8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 KAT6AQ92794 2004 aa8.64□□□□□ -1.03
MRPL40P1-201ENST00000542687 A0A1W2PQJ5 194 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 TBKBP1A7MCY6 615 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 LRRN2O75325 713 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 NOL4O94818 638 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 ASS1P00966 412 aaKnown RBP8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 GYPCP04921 128 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 LRPAP1P30533 357 aa8.63□□□□□ -1.03
MRPL40P1-201ENST00000542687 CASP14P31944 242 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms