RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 C18orf25Q96B23 403 aaPredicted RBP24.96■■□□□ 1.59
HOMER3-205ENST00000542541 DDX27Q96GQ7 796 aaKnown RBP24.96■■□□□ 1.59
HOMER3-205ENST00000542541 UROC1Q96N76 676 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 ITGA11Q9UKX5 1188 aa24.96■■□□□ 1.59
HOMER3-205ENST00000542541 PES1O00541 588 aaKnown RBP24.95■■□□□ 1.58
HOMER3-205ENST00000542541 P4HA2O15460 535 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 C4BPAP04003 597 aaKnown RBP24.95■■□□□ 1.58
HOMER3-205ENST00000542541 RPL9P32969 192 aaKnown RBP24.95■■□□□ 1.58
HOMER3-205ENST00000542541 FMO5P49326 533 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 COPB1P53618 953 aaKnown RBP24.95■■□□□ 1.58
HOMER3-205ENST00000542541 UVSSAQ2YD98 709 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 ZACNQ401N2 412 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 TDHQ8IZJ6 230 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 VPS16Q9H269 839 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 TUBGCP4Q9UGJ1 667 aa24.95■■□□□ 1.58
HOMER3-205ENST00000542541 CARNS1A5YM72 827 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 PMM2O15305 246 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 DSC1Q08554 894 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 MIIPQ5JXC2 388 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 C15orf39Q6ZRI6 1047 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-205ENST00000542541 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-205ENST00000542541 LRPAP1P30533 357 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 FANCCQ00597 558 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 TRPC3Q13507 836 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 ZNF280BQ86YH2 543 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 C1orf127Q8N9H9 656 aa24.94■■□□□ 1.58
HOMER3-205ENST00000542541 PTPRSQ13332 1948 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 DDHD2O94830 711 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 ALDH2P05091 517 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 KRT19P08727 400 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 RBP5P82980 135 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 MYL7Q01449 175 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 SOX4Q06945 474 aaPredicted RBP24.93■■□□□ 1.58
HOMER3-205ENST00000542541 FKBP15Q5T1M5 1219 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 TDRD10Q5VZ19 366 aaKnown RBP24.93■■□□□ 1.58
HOMER3-205ENST00000542541 CHRDL2Q6WN34 429 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 APTXQ7Z2E3 356 aaKnown RBP24.93■■□□□ 1.58
HOMER3-205ENST00000542541 COLGALT2Q8IYK4 626 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 FIBCD1Q8N539 461 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 TMEM175Q9BSA9 504 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 NRDE2Q9H7Z3 1164 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 RALGAPA2Q2PPJ7 1873 aa24.93■■□□□ 1.58
HOMER3-205ENST00000542541 ITGB3P05106 788 aa24.92■■□□□ 1.58
HOMER3-205ENST00000542541 CBWD6Q4V339 395 aa24.92■■□□□ 1.58
HOMER3-205ENST00000542541 CBWD3Q5JTY5 395 aa24.92■■□□□ 1.58
HOMER3-205ENST00000542541 CBWD5Q5RIA9 395 aa24.92■■□□□ 1.58
HOMER3-205ENST00000542541 FBXL13Q8NEE6 735 aa24.92■■□□□ 1.58
HOMER3-205ENST00000542541 GTPBP10A4D1E9 387 aaKnown RBP24.91■■□□□ 1.58
HOMER3-205ENST00000542541 CASTOR2A6NHX0 329 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 ZC3H11AO75152 810 aaKnown RBP eCLIP24.91■■□□□ 1.58
HOMER3-205ENST00000542541 TPM3P06753 285 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 ALDH7A1P49419 539 aaKnown RBP24.91■■□□□ 1.58
HOMER3-205ENST00000542541 GUCY2FP51841 1108 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 SPOUT1Q5T280 376 aaKnown RBP24.91■■□□□ 1.58
HOMER3-205ENST00000542541 C9orf57Q5W0N0 161 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 SP7Q8TDD2 431 aaPredicted RBP24.91■■□□□ 1.58
HOMER3-205ENST00000542541 FAM84AQ96KN4 292 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 PRO3102Q9H379 93 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 GOLGA2P5Q9HBQ8 144 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 AAASQ9NRG9 546 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 AGAP1Q9UPQ3 857 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 COQ4Q9Y3A0 265 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 PCDHA11Q9Y5I1 949 aa24.91■■□□□ 1.58
HOMER3-205ENST00000542541 ANO9A1A5B4 782 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 LGALS16A8MUM7 142 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 POLR2BP30876 1174 aaKnown RBP24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PNPLA4P41247 253 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 UBASH3AP57075 661 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 NCOA4Q13772 614 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 UPP1Q16831 310 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 DCLRE1AQ6PJP8 1040 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 CCDC150Q8NCX0 1101 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 IMPG2Q9BZV3 1241 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 CWH43Q9H720 699 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 RAB20Q9NX57 234 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 LAMA2P24043 3122 aaKnown RBP24.9■■□□□ 1.58
HOMER3-205ENST00000542541 ANK1P16157 1881 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 A0A1B0GTH6 734 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PODXLO00592 558 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PIRO00625 290 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 LAG3P18627 525 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PAX3P23760 479 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PIK3CAP42336 1068 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 OR1G1P47890 313 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 CLCNKBP51801 687 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 PLCB2Q00722 1185 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 MYO1EQ12965 1108 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 SGSM1Q2NKQ1 1148 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 GBP6Q6ZN66 633 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 LRRC52Q8N7C0 313 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 TAS1R2Q8TE23 839 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 COLEC11Q9BWP8 271 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 RTN4Q9NQC3 1192 aaKnown RBP24.9■■□□□ 1.58
HOMER3-205ENST00000542541 DNAJB4Q9UDY4 337 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 SIX4Q9UIU6 781 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 FAN1Q9Y2M0 1017 aa24.9■■□□□ 1.58
HOMER3-205ENST00000542541 MRPL42Q9Y6G3 142 aaKnown RBP24.9■■□□□ 1.58
HOMER3-205ENST00000542541 GOLGA6L3A6NEY3 463 aa24.89■■□□□ 1.57
HOMER3-205ENST00000542541 GRXCR1A8MXD5 290 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms