RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NHLH2Q02577 135 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 GTF2H3Q13889 308 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 LRRC41Q15345 812 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 KHDC1Q4VXA5 237 aaKnown RBP4.12□□□□□ -1.75
USP28-210ENST00000542033 CXorf57Q6NSI4 855 aaKnown RBP4.12□□□□□ -1.75
USP28-210ENST00000542033 MED25Q71SY5 747 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 UBE3BQ7Z3V4 1068 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 SYNE4Q8N205 404 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 PRR18Q8N4B5 295 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 C3orf20Q8ND61 904 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 NLGN4YQ8NFZ3 816 aaPredicted RBP4.12□□□□□ -1.75
USP28-210ENST00000542033 CPT1CQ8TCG5 803 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 HPS3Q969F9 1004 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 CLIP3Q96DZ5 547 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 MRGPRX4Q96LA9 322 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 DCLRE1CQ96SD1 692 aaKnown RBP4.12□□□□□ -1.75
USP28-210ENST00000542033 MYOCQ99972 504 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 VRK1Q99986 396 aaPredicted RBP4.12□□□□□ -1.75
USP28-210ENST00000542033 SLC23A1Q9UHI7 598 aa4.12□□□□□ -1.75
USP28-210ENST00000542033 TCRBV7S2A1N4TA0A589 114 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 DRGXA6NNA5 263 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 GRM6O15303 877 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 TSPAN6O43657 245 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 MAP4K4O95819 1239 aaPredicted RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 CD1AP06126 327 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 SPATA31D3P0C874 917 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 MALP21145 153 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 ACVRL1P37023 503 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 CHN2P52757 468 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 ZNF280AP59817 542 aaPredicted RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 DGCR2P98153 550 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 DSC2Q02487 901 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 TLE1Q04724 770 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 ZNF267Q14586 743 aaPredicted RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 CSRP2Q16527 193 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 MINDY4Q4G0A6 757 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 PABPC1LQ4VXU2 614 aaKnown RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 ATAT1Q5SQI0 421 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 DACT2Q5SW24 774 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 FAM102BQ5T8I3 360 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 SPATA31D4Q6ZUB0 917 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 CERS3Q8IU89 383 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 Q8N1X5 172 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 CAMKK1Q8N5S9 505 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 AOPEPQ8N6M6 819 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 SLC16A11Q8NCK7 471 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 SLC25A43Q8WUT9 341 aaPredicted RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 C1GALT1C1Q96EU7 318 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 PACSIN1Q9BY11 444 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 GNL3LQ9NVN8 582 aaKnown RBP4.11□□□□□ -1.75
USP28-210ENST00000542033 TRPM5Q9NZQ8 1165 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 GABBR1Q9UBS5 961 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 HS3ST3A1Q9Y663 406 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 PNPLA7Q6ZV29 1317 aa4.11□□□□□ -1.75
USP28-210ENST00000542033 GOLGA6CA6NDK9 693 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GOLGA6BA6NDN3 693 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 LRRC14BA6NHZ5 514 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 LEFTY2O00292 366 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 TPD52L2O43399 206 aaKnown RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 FAM20BO75063 409 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 HAUS5O94927 633 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 ITGB1P05556 798 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GOLGA6DP0CG33 693 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 RNASE9P60153 205 aaKnown RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 NOGQ13253 232 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 MLC1Q15049 377 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GORABQ5T7V8 394 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 NXNQ6DKJ4 435 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 SLC4A10Q6U841 1118 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 EPM2AIP1Q7L775 607 aaPredicted RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 GDF7Q7Z4P5 450 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 SYT12Q8IV01 421 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 WDR75Q8IWA0 830 aaKnown RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 TCEAL8Q8IYN2 117 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 MYO1HQ8N1T3 1032 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 ZNF276Q8N554 614 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 FITM2Q8N6M3 262 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 DCBLD1Q8N8Z6 715 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 DIS3LQ8TF46 1054 aaKnown RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 HAS1Q92839 578 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 DMRTA2Q96SC8 542 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 SLC46A2Q9BY10 475 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 SLC12A5Q9H2X9 1139 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GSTO2Q9H4Y5 243 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 MYH16Q9H6N6 1097 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 FBXO34Q9NWN3 711 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GOLGA6AQ9NYA3 693 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 FAM30AQ9NZY2 134 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 FEZ2Q9UHY8 353 aaPredicted RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 ATP11BQ9Y2G3 1177 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
USP28-210ENST00000542033 RIPOR2Q9Y4F9 1068 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 PCDHA3Q9Y5H8 950 aa4.1□□□□□ -1.75
USP28-210ENST00000542033 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 CDHR4A6H8M9 788 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 GAGE12HA6NDE8 117 aa4.09□□□□□ -1.75
USP28-210ENST00000542033 H3BUI4 141 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms