RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 WDR27A2RRH5 827 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 I3L4J1 428 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 K7ERI5 159 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 SYN3O14994 580 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 LRG1P02750 347 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 OR52Z1P0C646 297 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 ATF2P15336 505 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 CEBPBP17676 345 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 FCARP24071 287 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-207ENST00000541661 MRPL58Q14197 206 aaKnown RBP14.37□□□□□ -0.11
SCARB1-207ENST00000541661 ECM1Q16610 540 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
SCARB1-207ENST00000541661 POLD4Q9HCU8 107 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 HEBP1Q9NRV9 189 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 TOPORSQ9NS56 1045 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-207ENST00000541661 SLC38A7Q9NVC3 462 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 COL4A2P08572 1712 aa14.37□□□□□ -0.11
SCARB1-207ENST00000541661 CITO14578 2027 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 ZNF197O14709 1029 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 ELF1P32519 619 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 FOSBP53539 338 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
SCARB1-207ENST00000541661 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCARB1-207ENST00000541661 ZNF174Q15697 407 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 TPGS2Q68CL5 300 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 HAUS3Q68CZ6 603 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 CEP120Q8N960 986 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
SCARB1-207ENST00000541661 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-207ENST00000541661 CDT1Q9H211 546 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 BHMT2Q9H2M3 363 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 ZFP14Q9HCL3 533 aa14.36□□□□□ -0.11
SCARB1-207ENST00000541661 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
SCARB1-207ENST00000541661 PRR5-ARHGAP8B1AHC4 643 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 H7C4K7 107 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 PODXLO00592 558 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 PRRG1O14668 218 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 SEC24AO95486 1093 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 TDGF1P13385 188 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 KCNE1P15382 129 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 TGM1P22735 817 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 RPL9P32969 192 aaKnown RBP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 CCT6AP40227 531 aaKnown RBP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 ARHGAP8P85298 464 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 MTAPQ13126 283 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 PDIA5Q14554 519 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 FAM78AQ5JUQ0 283 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 TSSK4Q6SA08 328 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 TCEAL4Q96EI5 215 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 CORO1BQ9BR76 489 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 IER2Q9BTL4 223 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 TRMT61BQ9BVS5 477 aaKnown RBP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 CYP4F11Q9HBI6 524 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 MAFFQ9ULX9 164 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
SCARB1-207ENST00000541661 PHLPP2Q6ZVD8 1323 aa14.35□□□□□ -0.11
SCARB1-207ENST00000541661 ABLIM1O14639 778 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 PROZP22891 400 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 CCR2P41597 374 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 NPTX2P47972 431 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
SCARB1-207ENST00000541661 NRLP54845 237 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 MAP4K3Q8IVH8 894 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 DAW1Q8N136 415 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 IRF7Q92985 503 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 SUSD3Q96L08 255 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 ACAP3Q96P50 834 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 MRPL4Q9BYD3 311 aaKnown RBP14.34□□□□□ -0.11
SCARB1-207ENST00000541661 CHRDQ9H2X0 955 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 FOXP1Q9H334 677 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-207ENST00000541661 BRD9Q9H8M2 597 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 TRPV4Q9HBA0 871 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 ZNF334Q9HCZ1 680 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-207ENST00000541661 CNTN3Q9P232 1028 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 ARHGAP28Q9P2N2 729 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 FBXL5Q9UKA1 691 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 INSL5Q9Y5Q6 135 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 TICRRQ7Z2Z1 1910 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 NCOR2Q9Y618 2525 aa14.34□□□□□ -0.11
SCARB1-207ENST00000541661 NRG2O14511 850 aaPredicted RBP14.33□□□□□ -0.12
SCARB1-207ENST00000541661 MOSPD3O75425 235 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 MCF2P10911 925 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 PSMC3P17980 439 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 NEK4P51957 841 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 EPHA5P54756 1037 aa14.33□□□□□ -0.12
SCARB1-207ENST00000541661 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms