RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 OPA1O60313 960 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 TNFSF9P41273 254 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 TSHZ1Q6ZSZ6 1077 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 MON1BQ7L1V2 547 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 C1orf131Q8NDD1 294 aaKnown RBP14.74□□□□□ -0.05
RTN3-210ENST00000540798 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
RTN3-210ENST00000540798 FZD8Q9H461 694 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 SMARCAD1Q9H4L7 1026 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 CPSF3Q9UKF6 684 aaKnown RBP14.74□□□□□ -0.05
RTN3-210ENST00000540798 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 ASB14A6NK59 587 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 PRKCBP05771 671 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 MARK3P27448 753 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 DHX34Q14147 1143 aaKnown RBP14.74□□□□□ -0.05
RTN3-210ENST00000540798 CYP1B1Q16678 543 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 TMEM63BQ5T3F8 832 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 TRIM72Q6ZMU5 477 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 EFCAB13Q8IY85 973 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 ZDHHC14Q8IZN3 488 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 BTBD6Q96KE9 485 aa14.74□□□□□ -0.05
RTN3-210ENST00000540798 FAM187AA6NFU0 413 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 OGTO15294 1046 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 NOP14P78316 857 aaKnown RBP14.73□□□□□ -0.05
RTN3-210ENST00000540798 NCOA4Q13772 614 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 AADACL2Q6P093 401 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 CPNE8Q86YQ8 564 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 ZBTB8OSQ8IWT0 167 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 COPS5Q92905 334 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 NFKBIZQ9BYH8 718 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
RTN3-210ENST00000540798 FAM114A2Q9NRY5 505 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 UMODL1Q5DID0 1318 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 GOLGA6L10A0A0M3HER8 536 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 TMEM110-MUSTN1A8MSY1 372 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 PHF2O75151 1096 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 ASS1P00966 412 aaKnown RBP14.73□□□□□ -0.05
RTN3-210ENST00000540798 TXNP10599 105 aaKnown RBP14.73□□□□□ -0.05
RTN3-210ENST00000540798 GUCY2FP51841 1108 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 TTLL4Q14679 1199 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 SIX1Q15475 284 aaPredicted RBP14.73□□□□□ -0.05
RTN3-210ENST00000540798 ZNF792Q3KQV3 632 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 DUPD1Q68J44 220 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 SCARA3Q6AZY7 606 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 DDX42Q86XP3 938 aaKnown RBP eCLIP14.73□□□□□ -0.05
RTN3-210ENST00000540798 ABRAQ8N0Z2 381 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 PRELID2Q8N945 189 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 RNF149Q8NC42 400 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 PCYOX1Q9UHG3 505 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 SLC45A1Q9Y2W3 748 aa14.73□□□□□ -0.05
RTN3-210ENST00000540798 RBM47A0AV96 593 aaKnown RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 HBP1O60381 514 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PYGMP11217 842 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PTGIRP43119 386 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 NOMO3P69849 1222 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 ARHGAP1Q07960 439 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 MAPK6Q16659 721 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 SEZ6Q53EL9 994 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 TTMPQ5BVD1 217 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 MAMDC4Q6UXC1 1216 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 LRRC71Q8N4P6 559 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 VCPIP1Q96JH7 1222 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PDGFCQ9NRA1 345 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 TULP2O00295 520 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 DAPK3O43293 454 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 RPS6KA5O75582 802 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 DRG2P55039 364 aaKnown RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 PTP4A2Q12974 167 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PPFIA1Q13136 1202 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 SURF1Q15526 300 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 TAPT1Q6NXT6 567 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PHF13Q86YI8 300 aaPredicted RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 LINC01465Q8N7H1 131 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 FEZ2Q9UHY8 353 aaPredicted RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 PNMA3Q9UL41 463 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 UTP11Q9Y3A2 253 aaKnown RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 ACKR2O00590 384 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 SRGAP2CP0DJJ0 459 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 CHRNA3P32297 505 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 LMAN1P49257 510 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 DR1Q01658 176 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 CFAP58Q5T655 872 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 NAA35Q5VZE5 725 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PPP1R2P3Q6NXS1 205 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 LRIG3Q6UXM1 1119 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 C12orf50Q8NA57 414 aaPredicted RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 RBBP8NLQ8NC74 664 aaPredicted RBP14.72□□□□□ -0.05
RTN3-210ENST00000540798 CYFIP2Q96F07 1278 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 RAB17Q9H0T7 212 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 EFCC1Q9HA90 598 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 PCDHB4Q9Y5E5 795 aa14.72□□□□□ -0.05
RTN3-210ENST00000540798 EVPLQ92817 2033 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 ASAP2O43150 1006 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 SHOX2O60902 331 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 C22orf31O95567 290 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 CST3P01034 146 aaPredicted RBP14.71□□□□□ -0.05
RTN3-210ENST00000540798 CFHP08603 1231 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 HOXC6P09630 235 aa14.71□□□□□ -0.05
RTN3-210ENST00000540798 MBTD1Q05BQ5 628 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms