RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 DDX53Q86TM3 631 aaKnown RBP16.78■□□□□ 0.28
DDB1-218ENST00000540784 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
DDB1-218ENST00000540784 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 MICAL1Q8TDZ2 1067 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 GDPD5Q8WTR4 605 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 EEF2KMTQ96G04 330 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 LMAN2LQ9H0V9 348 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 RWDD2AQ9UIY3 292 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 LPXNO60711 386 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 TNNC2P02585 160 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 KRT13P13646 458 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 LRPAP1P30533 357 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 GUCY2FP51841 1108 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 DPCR1Q3MIW9 517 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 FILIP1Q7Z7B0 1213 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 USP37Q86T82 979 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 TMC2Q8TDI7 906 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 PARD3BQ8TEW8 1205 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 INTS13Q9NVM9 706 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 ANO10Q9NW15 660 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 LMCD1Q9NZU5 365 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 ADAM28Q9UKQ2 775 aa16.77■□□□□ 0.28
DDB1-218ENST00000540784 R3HCC1Q9Y3T6 440 aaKnown RBP16.77■□□□□ 0.28
DDB1-218ENST00000540784 F8W810 466 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 TMEM189-UBE2V1I3L0A0 370 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 KIF4AO95239 1232 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 DNAJB1P25685 340 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 ERCC5P28715 1186 aaPredicted RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 VAMP7P51809 220 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 ZC3H3Q8IXZ2 948 aaKnown RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 HASPINQ8TF76 798 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 MYLIPQ8WY64 445 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 CEP63Q96MT8 703 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 GUCD1Q96NT3 240 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 CGRRF1Q99675 332 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
DDB1-218ENST00000540784 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
DDB1-218ENST00000540784 PIRO00625 290 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 CXCL14O95715 111 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 POU3F3P20264 500 aaPredicted RBP16.75■□□□□ 0.27
DDB1-218ENST00000540784 AP3M2P53677 418 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 ERVFC1P60507 584 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 RBP5P82980 135 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 ELAVL2Q12926 359 aaKnown RBP16.75■□□□□ 0.27
DDB1-218ENST00000540784 ADGRE1Q14246 886 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 LMBRD2Q68DH5 695 aaPredicted RBP16.75■□□□□ 0.27
DDB1-218ENST00000540784 PDE12Q6L8Q7 609 aaKnown RBP16.75■□□□□ 0.27
DDB1-218ENST00000540784 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 GPR62Q9BZJ7 368 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 CHD9Q3L8U1 2897 aa16.75■□□□□ 0.27
DDB1-218ENST00000540784 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDB1-218ENST00000540784 ANO9A1A5B4 782 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 IKBKBO14920 756 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
DDB1-218ENST00000540784 KRT19P08727 400 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 PAX3P23760 479 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 IGFBP6P24592 240 aaPredicted RBP16.74■□□□□ 0.27
DDB1-218ENST00000540784 DLG4P78352 724 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 CLDN10P78369 228 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 ENPEPQ07075 957 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 CAMK1Q14012 370 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 STX1AQ16623 288 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
DDB1-218ENST00000540784 USP41Q3LFD5 358 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 FAM171A1Q5VUB5 890 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 KIAA1841Q6NSI8 718 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 FUT10Q6P4F1 479 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 TAS1R1Q7RTX1 841 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 PLEKHO2Q8TD55 490 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 ZNF516Q92618 1163 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 BORCS6Q96GS4 357 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 TCF25Q9BQ70 676 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
DDB1-218ENST00000540784 METTL14Q9HCE5 456 aaKnown RBP16.74■□□□□ 0.27
DDB1-218ENST00000540784 NGRNQ9NPE2 291 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms