RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TDP1Q9NUW8 608 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 DKK2Q9UBU2 259 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 EPN1Q9Y6I3 576 aaPredicted RBP4.91□□□□□ -1.62
MDM2-227ENST00000540709 KLHL33A6NCF5 533 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 ZAR1LA6NP61 321 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 NDUFS2O75306 463 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 SEC24CP53992 1094 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 EVA1CP58658 441 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 NOMO3P69849 1222 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 CXADRP78310 365 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 FOXI1Q12951 378 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 MTM1Q13496 603 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 ATP2B3Q16720 1220 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 ERCC6LQ2NKX8 1250 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 SEM1Q6ZVN7 128 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 MIGA2Q7L4E1 593 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 GPR149Q86SP6 731 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 C1orf162Q8NEQ5 155 aaPredicted RBP4.9□□□□□ -1.63
MDM2-227ENST00000540709 JADE3Q92613 823 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 PTCD3Q96EY7 689 aaKnown RBP4.9□□□□□ -1.63
MDM2-227ENST00000540709 FAXDC2Q96IV6 333 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 C11orf54Q9H0W9 315 aaPredicted RBP4.9□□□□□ -1.63
MDM2-227ENST00000540709 GALNT9Q9HCQ5 603 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 ZNF277Q9NRM2 450 aaPredicted RBP4.9□□□□□ -1.63
MDM2-227ENST00000540709 TBCCD1Q9NVR7 557 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 SBNO2Q9Y2G9 1366 aa4.9□□□□□ -1.63
MDM2-227ENST00000540709 KATNA1O75449 491 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 EGR2P11161 476 aaPredicted RBP4.89□□□□□ -1.63
MDM2-227ENST00000540709 GCSHP23434 173 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 SLC16A1P53985 500 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 KIF23Q02241 960 aaPredicted RBP4.89□□□□□ -1.63
MDM2-227ENST00000540709 MPP3Q13368 585 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 ARMC6Q6NXE6 501 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 PNMA8AQ86V59 439 aaPredicted RBP4.89□□□□□ -1.63
MDM2-227ENST00000540709 TMX1Q9H3N1 280 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 KIAA1586Q9HCI6 787 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 SYBUQ9NX95 663 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 TUBD1Q9UJT1 453 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 TRHDEQ9UKU6 1024 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 MRFAP1Q9Y605 127 aa4.89□□□□□ -1.63
MDM2-227ENST00000540709 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 CDK11BP21127 795 aaKnown RBP4.88□□□□□ -1.63
MDM2-227ENST00000540709 C5AR1P21730 350 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 FDXRP22570 491 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 PTH2RP49190 550 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 KRTAP1-1Q07627 177 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 IL10RAQ13651 578 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 GADL1Q6ZQY3 521 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 NECAB2Q7Z6G3 386 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 HDAC10Q969S8 669 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 COQ10AQ96MF6 247 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 PNKPQ96T60 521 aa4.88□□□□□ -1.63
MDM2-227ENST00000540709 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 TRIM75PA6NK02 468 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 K7ESF4 209 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 GRM6O15303 877 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 AGFG2O95081 481 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 ESRRBO95718 433 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 TGM1P22735 817 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 CCND1P24385 295 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 ADRA1BP35368 520 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 MPLP40238 635 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 CTXN1P60606 82 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 ATP8B2P98198 1209 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 TARDBPQ13148 414 aaKnown RBP eCLIP4.87□□□□□ -1.63
MDM2-227ENST00000540709 MTMR1Q13613 665 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 PCBP2Q15366 365 aaKnown RBP eCLIP4.87□□□□□ -1.63
MDM2-227ENST00000540709 GEN1Q17RS7 908 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 UTP14CQ5TAP6 766 aaKnown RBP4.87□□□□□ -1.63
MDM2-227ENST00000540709 SYDE2Q5VT97 1194 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 COLGALT2Q8IYK4 626 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 CBARPQ8N350 705 aaPredicted RBP4.87□□□□□ -1.63
MDM2-227ENST00000540709 NLGN4YQ8NFZ3 816 aaPredicted RBP4.87□□□□□ -1.63
MDM2-227ENST00000540709 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 NACC2Q96BF6 587 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 BOD1Q96IK1 185 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 SMAD5Q99717 465 aaKnown RBP4.87□□□□□ -1.63
MDM2-227ENST00000540709 AIFM2Q9BRQ8 373 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 SYNPO2LQ9H987 977 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 PTGFRNQ9P2B2 879 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 LRIT1Q9P2V4 623 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 KCNE5Q9UJ90 142 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 CDYLQ9Y232 598 aa4.87□□□□□ -1.63
MDM2-227ENST00000540709 PCDHGA12O60330 932 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 SBK3P0C264 359 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 MTHFD1P11586 935 aaKnown RBP4.86□□□□□ -1.63
MDM2-227ENST00000540709 FCER1AP12319 257 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 CDKN1CP49918 316 aaPredicted RBP4.86□□□□□ -1.63
MDM2-227ENST00000540709 ZNF280AP59817 542 aaPredicted RBP4.86□□□□□ -1.63
MDM2-227ENST00000540709 CYP2A13Q16696 494 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 PTPN21Q16825 1174 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 UAP1L1Q3KQV9 507 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 ADGRG3Q86Y34 549 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 NUP133Q8WUM0 1156 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 KAT5Q92993 513 aa4.86□□□□□ -1.63
MDM2-227ENST00000540709 CLPTM1LQ96KA5 538 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms