RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SYN3O14994 580 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 C8AP07357 584 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 CXCL8P10145 99 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 TXLNAP40222 546 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 PPM1LQ5SGD2 360 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 RTL10Q7L3V2 364 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 PRRX2Q99811 253 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 ZHX3Q9H4I2 956 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 KCNK12Q9HB15 430 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.87■■□□□ 1.252e-7■■■■□ 26
CHFR-217ENST00000540537 NUB1Q9Y5A7 615 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 CDY1Q9Y6F8 540 aa22.87■■□□□ 1.25
CHFR-217ENST00000540537 PIEZO1Q92508 2521 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 TTC26A0AVF1 554 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 STX6O43752 255 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 POU2F2P09086 479 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 GTF2BQ00403 316 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 CEBPZQ03701 1054 aaKnown RBP22.86■■□□□ 1.25
CHFR-217ENST00000540537 TDGQ13569 410 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 UVSSAQ2YD98 709 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 RSPO2Q6UXX9 243 aaPredicted RBP22.86■■□□□ 1.25
CHFR-217ENST00000540537 MAP4K3Q8IVH8 894 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 KRI1Q8N9T8 703 aaKnown RBP22.86■■□□□ 1.25
CHFR-217ENST00000540537 CLIC6Q96NY7 704 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 MYADMQ96S97 322 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
CHFR-217ENST00000540537 OGTO15294 1046 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 FAM189A1O60320 539 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 XYLBO75191 536 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 PDGFBP01127 241 aaPredicted RBP22.85■■□□□ 1.25
CHFR-217ENST00000540537 PPP2R3AQ06190 1150 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 SLC39A14Q15043 492 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 VARS2Q5ST30 1063 aaKnown RBP22.85■■□□□ 1.25
CHFR-217ENST00000540537 SLC7A14Q8TBB6 771 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 SNX21Q969T3 373 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 NXPE3Q969Y0 559 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 SUSD3Q96L08 255 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 USP28Q96RU2 1077 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 ST6GALNAC4Q9H4F1 302 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 TUBGCP4Q9UGJ1 667 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 DUSP12Q9UNI6 340 aa22.85■■□□□ 1.25
CHFR-217ENST00000540537 A0A0B4J269 797 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 H7C4K7 107 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 NMT1P30419 496 aaKnown RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 AVPR2P30518 371 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 HOXD11P31277 338 aaPredicted RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 TNFSF9P41273 254 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 VCPP55072 806 aaKnown RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 AXDND1Q5T1B0 1012 aaPredicted RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 RRAGBQ5VZM2 374 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 SLC8B1Q6J4K2 584 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 GET4Q7L5D6 327 aaPredicted RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 KIF12Q96FN5 646 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 TSPAN18Q96SJ8 248 aa22.84■■□□□ 1.25
CHFR-217ENST00000540537 UBQLN1Q9UMX0 589 aaKnown RBP22.84■■□□□ 1.25
CHFR-217ENST00000540537 TBC1D4O60343 1298 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 ADRB2P07550 413 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 LAMP2P13473 410 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 CYP3A5P20815 502 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 FSHRP23945 695 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 LRPAP1P30533 357 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 MCM4P33991 863 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 NHLH1Q02575 133 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 MRPL58Q14197 206 aaKnown RBP22.83■■□□□ 1.25
CHFR-217ENST00000540537 ZBTB6Q15916 424 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 IER5LQ5T953 404 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 SLC39A4Q6P5W5 647 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 GRASPQ7Z6J2 395 aaPredicted RBP22.83■■□□□ 1.25
CHFR-217ENST00000540537 PRSS33Q8NF86 280 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 MSTO1Q9BUK6 570 aa22.83■■□□□ 1.25
CHFR-217ENST00000540537 RPF1Q9H9Y2 349 aaKnown RBP22.83■■□□□ 1.25
CHFR-217ENST00000540537 ZFP37Q9Y6Q3 630 aaPredicted RBP22.83■■□□□ 1.25
CHFR-217ENST00000540537 MYH15Q9Y2K3 1946 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 LACTBL1A8MY62 500 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 CCL16O15467 120 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 XPOTO43592 962 aaKnown RBP22.82■■□□□ 1.24
CHFR-217ENST00000540537 NASPP49321 788 aaPredicted RBP22.82■■□□□ 1.24
CHFR-217ENST00000540537 ROR1Q01973 937 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 ENOX2Q16206 610 aaKnown RBP22.82■■□□□ 1.24
CHFR-217ENST00000540537 ZBTB41Q5SVQ8 909 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 CCDC73Q6ZRK6 1079 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 SV2BQ7L1I2 683 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 CD302Q8IX05 232 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 APPL2Q8NEU8 664 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 ZNF461Q8TAF7 563 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 DDX12PQ92771 950 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 SEL1LQ9UBV2 794 aa22.82■■□□□ 1.24
CHFR-217ENST00000540537 ABLIM3O94929 683 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 NUBP1P53384 320 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 PTPN5P54829 565 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 SPAG1Q07617 926 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 ZC2HC1CQ53FD0 456 aaPredicted RBP22.81■■□□□ 1.24
CHFR-217ENST00000540537 DYMQ7RTS9 669 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 ZNF720Q7Z2F6 126 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 SFR1Q86XK3 245 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 HVCN1Q96D96 273 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 FBXL5Q9UKA1 691 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 CPSF3Q9UKF6 684 aaKnown RBP22.81■■□□□ 1.24
CHFR-217ENST00000540537 PCDHB8Q9UN66 801 aa22.81■■□□□ 1.24
CHFR-217ENST00000540537 POLIQ9UNA4 740 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms