RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 SMYD4Q8IYR2 804 aaPredicted RBP23.94■■□□□ 1.42
TRIM65-202ENST00000540128 MICALL1Q8N3F8 863 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 PPP2R3CQ969Q6 453 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 CLSTN2Q9H4D0 955 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 KIAA1468Q9P260 1216 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 BRWD1Q9NSI6 2320 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 CALUO43852 315 aaPredicted RBP23.93■■□□□ 1.42
TRIM65-202ENST00000540128 CYP2J2P51589 502 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 DSG1Q02413 1049 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 MORC3Q14149 939 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 SURF1Q15526 300 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 SNRNP35Q16560 246 aaKnown RBP23.93■■□□□ 1.42
TRIM65-202ENST00000540128 ZCWPW2Q504Y3 356 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 KIAA0319Q5VV43 1072 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 EFCAB13Q8IY85 973 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 ADSSL1Q8N142 457 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 C3orf58Q8NDZ4 430 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 BEST2Q8NFU1 509 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 MFSD14AQ96MC6 490 aa23.93■■□□□ 1.42
TRIM65-202ENST00000540128 ATG2AQ2TAZ0 1938 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 ANK1P16157 1881 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 HIDE1A8MVS5 230 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 EXOC3O60645 756 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 NR3C1P04150 777 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 BMP6P22004 513 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 HYAL1Q12794 435 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 PTPN14Q15678 1187 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 CAMK4Q16566 473 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 USP41Q3LFD5 358 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 PLPP4Q5VZY2 271 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 CENPPQ6IPU0 288 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 ADGRD2Q7Z7M1 963 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 PPM1EQ8WY54 764 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 CDCA3Q99618 268 aaPredicted RBP23.92■■□□□ 1.42
TRIM65-202ENST00000540128 PDE11AQ9HCR9 933 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 SSX2IPQ9Y2D8 614 aa23.92■■□□□ 1.42
TRIM65-202ENST00000540128 ANO9A1A5B4 782 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 TRAPPC3O43617 180 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 PAX3P23760 479 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 GUCY2FP51841 1108 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 CYP24A1Q07973 514 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 PSMD6Q15008 389 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 DUSP6Q16828 381 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 EDRF1Q3B7T1 1238 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 TRIML1Q8N9V2 468 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 TLE6Q9H808 572 aa23.91■■□□□ 1.42
TRIM65-202ENST00000540128 MRPL17Q9NRX2 175 aaKnown RBP23.91■■□□□ 1.42
TRIM65-202ENST00000540128 PIRO00625 290 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 CSPG5O95196 566 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 FGFR3P22607 806 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 PPP1R2P41236 205 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 GLUD2P49448 558 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 AARSP49588 968 aaKnown RBP eCLIP23.9■■□□□ 1.422e-6■■■□□ 17.5
TRIM65-202ENST00000540128 CTC1Q2NKJ3 1217 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 C9orf57Q5W0N0 161 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 TMEM130Q8N3G9 435 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 RDH13Q8NBN7 331 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 GPT2Q8TD30 523 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 HASPINQ8TF76 798 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 NOC3LQ8WTT2 800 aaKnown RBP23.9■■□□□ 1.42
TRIM65-202ENST00000540128 CACTINQ8WUQ7 758 aaKnown RBP23.9■■□□□ 1.42
TRIM65-202ENST00000540128 DHTKD1Q96HY7 919 aaPredicted RBP23.9■■□□□ 1.42
TRIM65-202ENST00000540128 RXFP1Q9HBX9 757 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 DPP3Q9NY33 737 aa23.9■■□□□ 1.42
TRIM65-202ENST00000540128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.89■■□□□ 1.41
TRIM65-202ENST00000540128 FSD2A1L4K1 749 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 MAPK13O15264 365 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 URODP06132 367 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 RPL13P26373 211 aaKnown RBP23.89■■□□□ 1.41
TRIM65-202ENST00000540128 NRIP1P48552 1158 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 MCCD1P59942 119 aaPredicted RBP23.89■■□□□ 1.41
TRIM65-202ENST00000540128 FAM171A1Q5VUB5 890 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 ISM2Q6H9L7 571 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.89■■□□□ 1.41
TRIM65-202ENST00000540128 EFHBQ8N7U6 833 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 AUTS2Q8WXX7 1259 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 PABPC5Q96DU9 382 aaKnown RBP23.89■■□□□ 1.41
TRIM65-202ENST00000540128 TTPALQ9BTX7 342 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 INTS13Q9NVM9 706 aa23.89■■□□□ 1.41
TRIM65-202ENST00000540128 PPP1R3GB7ZBB8 358 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 GTF2F1P35269 517 aaKnown RBP eCLIP23.88■■□□□ 1.412e-12■■■■□ 19.5
TRIM65-202ENST00000540128 BRCC3P46736 316 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 TFAMQ00059 246 aaKnown RBP23.88■■□□□ 1.41
TRIM65-202ENST00000540128 ADAM15Q13444 863 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 KCNC3Q14003 757 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 KIAA1841Q6NSI8 718 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 FOXR2Q6PJQ5 311 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 CXorf38Q8TB03 319 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 PIK3R5Q8WYR1 880 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 SUSD3Q96L08 255 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 GZF1Q9H116 711 aaPredicted RBP23.88■■□□□ 1.41
TRIM65-202ENST00000540128 NUP62CLQ9H1M0 184 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 COG5Q9UP83 839 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 NUB1Q9Y5A7 615 aa23.88■■□□□ 1.41
TRIM65-202ENST00000540128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.87■■□□□ 1.41
TRIM65-202ENST00000540128 BIN1O00499 593 aa23.87■■□□□ 1.41
TRIM65-202ENST00000540128 PER2O15055 1255 aa23.87■■□□□ 1.41
TRIM65-202ENST00000540128 CLASP2O75122 1294 aaKnown RBP23.87■■□□□ 1.41
TRIM65-202ENST00000540128 CD44P16070 742 aaKnown RBP23.87■■□□□ 1.41
TRIM65-202ENST00000540128 NR2F2P24468 414 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms