RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MKNK1Q9BUB5 465 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 ZNF302Q9NR11 478 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 SEPT10Q9P0V9 454 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
TRAF1-202ENST00000540010 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
TRAF1-202ENST00000540010 KCNJ1P48048 391 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 KLHDC7AQ5VTJ3 777 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 B3GNT9Q6UX72 402 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 TTC17Q96AE7 1141 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 C11orf70Q9BRQ4 267 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 ASCC2Q9H1I8 757 aaPredicted RBP10.62□□□□□ -0.71
TRAF1-202ENST00000540010 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
TRAF1-202ENST00000540010 SSU72P8A0A1W2PR75 194 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 LUC7L3O95232 432 aaKnown RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 ESRRAP11474 423 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 FMO5P49326 533 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 GHRHRQ02643 423 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 DNAJC24Q6P3W2 148 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 SLC7A3Q8WY07 619 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 YIPF3Q9GZM5 350 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 TXLNGQ9NUQ3 528 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 ZSCAN5CA6NGD5 496 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 TISP43B9A030 160 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 MTM1Q13496 603 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 GJB7Q6PEY0 223 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 SCARA5Q6ZMJ2 495 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 DAW1Q8N136 415 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 MAML1Q92585 1016 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 CBWD1Q9BRT8 395 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 MRPL47Q9HD33 250 aaKnown RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 HSPBP1Q9NZL4 362 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 LCMT1Q9UIC8 334 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 DGAT1O75907 488 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 LYPLA2O95372 231 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 YBX3P16989 372 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 IGBP1P78318 339 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 SH3D19Q5HYK7 790 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 USP50Q70EL3 339 aaPredicted RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 FASTKD5Q7L8L6 764 aaKnown RBP10.61□□□□□ -0.71
TRAF1-202ENST00000540010 DNERQ8NFT8 737 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 HDAC7Q8WUI4 952 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 SAAL1Q96ER3 474 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 NUP85Q9BW27 656 aa10.61□□□□□ -0.71
TRAF1-202ENST00000540010 INO80B-WBP1J3KQ70 363 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 MAPK13O15264 365 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 FANCGO15287 622 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SPAG7O75391 227 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 PGK2P07205 417 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 HNRNPH3P31942 346 aaKnown RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 VAMP7P51809 220 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 MAPK7Q13164 816 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 XKR3Q5GH77 459 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 RFX8Q6ZV50 586 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 ANO5Q75V66 913 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 NME8Q8N427 588 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 ZNF564Q8TBZ8 553 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 PRMT1Q99873 361 aaKnown RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 POLR3FQ9H1D9 316 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 ZWILCHQ9H900 591 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SMYD2Q9NRG4 433 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 TCP11X1B4DZS4 312 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 CXCL11O14625 94 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 EVI5O60447 810 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 NOL4O94818 638 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 KCNA2P16389 499 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 NPTX2P47972 431 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 COG7P83436 770 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 RIOX2Q8IUF8 465 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 CCDC60Q8IWA6 550 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 DCLK2Q8N568 766 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SLC35G2Q8TBE7 412 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SYN2Q92777 582 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 VTI1AQ96AJ9 217 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 NRBP2Q9NSY0 501 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 EMSYQ7Z589 1322 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 IQCA1LA6NCM1 817 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SUPT20HL2P0C7V6 817 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 CHN1P15882 459 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 HNRNPH1P31943 449 aaKnown RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 FAM160B1Q5W0V3 765 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 PDIK1LQ8N165 341 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 GBP7Q8N8V2 638 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 C9orf72Q96LT7 481 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 NUF2Q9BZD4 464 aa10.6□□□□□ -0.71
TRAF1-202ENST00000540010 INTS2Q9H0H0 1204 aaKnown RBP10.6□□□□□ -0.71
TRAF1-202ENST00000540010 SLITRK6Q9H5Y7 841 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms