RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 RSAD1Q9HA92 442 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 KIAA1586Q9HCI6 787 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 SLC39A2Q9NP94 309 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 CGNQ9P2M7 1197 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 INPP5FQ9Y2H2 1132 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 GIT1Q9Y2X7 761 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 PCDHB12Q9Y5F1 795 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 CENPFP49454 3210 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 UBE4BO95155 1302 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 FRMD3A2A2Y4 597 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 CALUO43852 315 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 MGEA5O60502 916 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 DGKIO75912 1065 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 PRPF6O94906 941 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 ALDH2P05091 517 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 RPL13P26373 211 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 MSX1P28360 303 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 HOXA11P31270 313 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 EPHA4P54764 986 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 OSTNP61366 133 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 FOXK2Q01167 660 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 KRT17Q04695 432 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 DPYDQ12882 1025 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 PNOCQ13519 176 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 DSC3Q14574 896 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 CAMK4Q16566 473 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 KNOP1Q1ED39 458 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 SKOR2Q2VWA4 1001 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 PAN2Q504Q3 1202 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 NOMO2Q5JPE7 1267 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 HABP4Q5JVS0 413 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 NT5DC1Q5TFE4 455 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 ARMCX5Q6P1M9 558 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 RTN4RL1Q86UN2 441 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 CDR2LQ86X02 465 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 MAP4K3Q8IVH8 894 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 THNSL1Q8IYQ7 743 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 LRRC43Q8N309 656 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 GPR161Q8N6U8 529 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 TIFAQ96CG3 184 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 PDZD7Q9H5P4 517 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 RPF1Q9H9Y2 349 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 SLC38A7Q9NVC3 462 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 CUEDC1Q9NWM3 386 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 PUF60Q9UHX1 559 aaKnown RBP7.05□□□□□ -1.28
SNHG1-212ENST00000539975 GDAQ9Y2T3 454 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 IPPQ9Y573 584 aa7.05□□□□□ -1.28
SNHG1-212ENST00000539975 ADGRA3Q8IWK6 1321 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 TMEM265A0A087WTH1 108 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 GRXCR1A8MXD5 290 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 PSMA7O14818 248 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 OGTO15294 1046 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 LPXNO60711 386 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 DKK1O94907 266 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 RHOBTB3O94955 611 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 LETM1O95202 739 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 FGFR1OPO95684 399 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 THP07101 528 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 CA3P07451 260 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 CLTAP09496 248 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 MYBP10242 640 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 FGFR1P11362 822 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 LAG3P18627 525 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 GARTP22102 1010 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 AKAP5P24588 427 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 CASP1P29466 404 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 MCM4P33991 863 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 RABGGTBP53611 331 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 SEC13P55735 322 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 MCL1Q07820 350 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 DBN1Q16643 649 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 TPD52L1Q16890 204 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF658Q5TYW1 1059 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 SASS6Q6UVJ0 657 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 MRPL10Q7Z7H8 261 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 CD302Q8IX05 232 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 NELFCDQ8IXH7 590 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF295-AS1Q8N0V1 137 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 TRIML1Q8N9V2 468 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF507Q8TCN5 953 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 HELQQ8TDG4 1101 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 KCNN1Q92952 543 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 HPS3Q969F9 1004 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF837Q96EG3 531 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 TGS1Q96RS0 853 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 TSPAN18Q96SJ8 248 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
SNHG1-212ENST00000539975 NUCKS1Q9H1E3 243 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 NXF3Q9H4D5 531 aaKnown RBP7.04□□□□□ -1.28
SNHG1-212ENST00000539975 PLEKHA5Q9HAU0 1116 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms