RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 OSMRQ99650 979 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 IRX2Q9BZI1 471 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 NAGPAQ9UK23 515 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 CABYRO75952 493 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 ABL1P00519 1130 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 TMEM191BP0C7N4 346 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 GRM5P41594 1212 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 SLC27A1Q6PCB7 646 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 RPAINQ86UA6 219 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 RSPH3Q86UC2 560 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 NT5DC4Q86YG4 428 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 CD302Q8IX05 232 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 SLC30A5Q8TAD4 765 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 PPP1R13LQ8WUF5 828 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 KAT5Q92993 513 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 TATDN2Q93075 761 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 FAM212AQ96EL1 285 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 L2HGDHQ9H9P8 463 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 INTUQ9ULD6 942 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 GINS2Q9Y248 185 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 ASGR1P07306 291 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 CXCL8P10145 99 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 NOP14P78316 857 aaKnown RBP18.14■□□□□ 0.49
COPS3-212ENST00000539941 KCNA10Q16322 511 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 RNF180Q86T96 592 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 SLC35F6Q8N357 371 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 RNF10Q8N5U6 811 aaKnown RBP18.14■□□□□ 0.49
COPS3-212ENST00000539941 SECISBP2LQ93073 1101 aaKnown RBP18.14■□□□□ 0.49
COPS3-212ENST00000539941 PI4K2AQ9BTU6 479 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 MTMR12Q9C0I1 747 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 CDHR5Q9HBB8 845 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 TRIM10Q9UDY6 481 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 MROH7Q68CQ1 1323 aa18.14■□□□□ 0.49
COPS3-212ENST00000539941 BTNL10A8MVZ5 291 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.492e-11■■□□□ 12.8
COPS3-212ENST00000539941 FANCGO15287 622 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 TNRC18O15417 2968 aaPredicted RBP18.13■□□□□ 0.49
COPS3-212ENST00000539941 ASS1P00966 412 aaKnown RBP18.13■□□□□ 0.49
COPS3-212ENST00000539941 OSTNP61366 133 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 TFAMQ00059 246 aaKnown RBP18.13■□□□□ 0.49
COPS3-212ENST00000539941 EFCAB13Q8IY85 973 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 OLIG1Q8TAK6 271 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 ACAP3Q96P50 834 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 AGPAT1Q99943 283 aa18.13■□□□□ 0.49
COPS3-212ENST00000539941 CTAGE9A4FU28 777 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 LACTBL1A8MY62 500 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 M0QZ92 97 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 CHRM1P11229 460 aaPredicted RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 TNFAIP3P21580 790 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 USP8P40818 1118 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 MRPS6P82932 125 aaKnown RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 TRPC3Q13507 836 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 CUL2Q13617 745 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TUBB2AQ13885 445 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 SGSM1Q2NKQ1 1148 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TMEM192Q8IY95 271 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TRIM58Q8NG06 486 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TAF4BQ92750 862 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 FAXDC2Q96IV6 333 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 FAM84AQ96KN4 292 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TUBB2BQ9BVA1 445 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 CELF4Q9BZC1 486 aaKnown RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 PLEKHA5Q9HAU0 1116 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TFR2Q9UP52 801 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 C2CD2Q9Y426 696 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 TACC1O75410 805 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 FGFR4P22455 802 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 BPIFB4P59827 614 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 RALGAPA2Q2PPJ7 1873 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 SLC10A6Q3KNW5 377 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 GDF6Q6KF10 455 aaPredicted RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 SERINC5Q86VE9 423 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 LNX1Q8TBB1 728 aaPredicted RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 EPS8L1Q8TE68 723 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 NAPGQ99747 312 aaPredicted RBP18.12■□□□□ 0.49
COPS3-212ENST00000539941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.12■□□□□ 0.49
COPS3-212ENST00000539941 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
COPS3-212ENST00000539941 CYP26A1O43174 497 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 NPTXRO95502 500 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 H2AFZP0C0S5 128 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 PDE6CP51160 858 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 FAM47CQ5HY64 1035 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 H2AFVQ71UI9 128 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 GLYCTKQ8IVS8 523 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 U2AF1L4Q8WU68 220 aaKnown RBP18.11■□□□□ 0.49
COPS3-212ENST00000539941 ARMC5Q96C12 935 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 NOX5Q96PH1 765 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 ALS2CR12Q96Q35 445 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 TSEN34Q9BSV6 310 aaKnown RBP18.11■□□□□ 0.49
COPS3-212ENST00000539941 APOBEC3GQ9HC16 384 aaKnown RBP18.11■□□□□ 0.49
COPS3-212ENST00000539941 NOCTQ9UK39 431 aaKnown RBP18.11■□□□□ 0.49
COPS3-212ENST00000539941 DERAQ9Y315 318 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 PTCH2Q9Y6C5 1203 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 DUSP10Q9Y6W6 482 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 CITO14578 2027 aa18.11■□□□□ 0.49
COPS3-212ENST00000539941 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms