RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PLA2G4FQ68DD2 849 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 ZIM3Q96PE6 472 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 UPF3AQ9H1J1 476 aaKnown RBP15.35■□□□□ 0.05
CACNB1-206ENST00000539338 CARNS1A5YM72 827 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 A8MXQ7 604 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 KPNA7A9QM74 516 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TRIM66O15016 1216 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TBX3O15119 743 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 APOEP02649 317 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TTC1Q99614 292 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 MEFVO15553 781 aaPredicted RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 TOB1P50616 345 aaPredicted RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 EIF3EP60228 445 aaKnown RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 POU5F1BQ06416 359 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 BAATQ14032 418 aaPredicted RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 TRABDQ9H4I3 376 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 SLC37A4O43826 429 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 MGEA5O60502 916 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 CHEK2O96017 543 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 SLC1A1P43005 524 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 FSCBQ5H9T9 825 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 GNASQ5JWF2 1037 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 RGS9BPQ6ZS82 235 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 CYP4F11Q9HBI6 524 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 KLC4Q9NSK0 619 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 STOML1Q9UBI4 398 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 ORC6Q9Y5N6 252 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 MROH2AA6NES4 1674 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 STAT4Q14765 748 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 SPATA21Q7Z572 469 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 PRPF31Q8WWY3 499 aaKnown RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 KIF12Q96FN5 646 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 ATXN7L3BQ96GX2 97 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 DRC3Q9H069 523 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 MAP3K20Q9NYL2 800 aaKnown RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 PPME1Q9Y570 386 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 RGL2O15211 777 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 HOXA2O43364 376 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 AGTP01019 485 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 NSUN2Q08J23 767 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 ACAD11Q709F0 780 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 ST13P4Q8IZP2 240 aaPredicted RBP15.34■□□□□ 0.05
CACNB1-206ENST00000539338 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 PNKPQ96T60 521 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 FUCA2Q9BTY2 467 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 UVRAGQ9P2Y5 699 aa15.34■□□□□ 0.05
CACNB1-206ENST00000539338 PPLO60437 1756 aa15.33■□□□□ 0.05
CACNB1-206ENST00000539338 RASSF3Q86WH2 238 aa15.33■□□□□ 0.05
CACNB1-206ENST00000539338 ELOA2Q8IYF1 753 aaPredicted RBP15.33■□□□□ 0.05
CACNB1-206ENST00000539338 AGR3Q8TD06 166 aa15.33■□□□□ 0.05
CACNB1-206ENST00000539338 RBM15Q96T37 977 aaKnown RBP eCLIP15.33■□□□□ 0.05
CACNB1-206ENST00000539338 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.05
CACNB1-206ENST00000539338 KDM6AO15550 1401 aaPredicted RBP15.33■□□□□ 0.05
CACNB1-206ENST00000539338 COMTP21964 271 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 ERFP50548 548 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 STAT5BP51692 787 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 FOXD4Q12950 439 aaPredicted RBP15.33■□□□□ 0.04
CACNB1-206ENST00000539338 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 ALKBH8Q96BT7 664 aaKnown RBP15.33■□□□□ 0.04
CACNB1-206ENST00000539338 ERGIC2Q96RQ1 377 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 XAB2Q9HCS7 855 aaKnown RBP15.33■□□□□ 0.04
CACNB1-206ENST00000539338 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
CACNB1-206ENST00000539338 PRKCBP05771 671 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 IER5Q5VY09 327 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 FBXW10Q5XX13 1052 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 JAMLQ86YT9 394 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 CDKL3Q8IVW4 592 aaPredicted RBP15.33■□□□□ 0.04
CACNB1-206ENST00000539338 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 CXCL11O14625 94 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 LCP1P13796 627 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 NBPF20Q3BBV1 942 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 CATSPER3Q86XQ3 398 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.04
CACNB1-206ENST00000539338 DYNC1LI2O43237 492 aaPredicted RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 GH1P01241 217 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 KCNJ1P48048 391 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 PAPOLAP51003 745 aaKnown RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 EPC2Q52LR7 807 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 LRIG3Q6UXM1 1119 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 TNS2Q63HR2 1409 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 SALL3Q9BXA9 1300 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 DGAT1O75907 488 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 RPA1P27694 616 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 TYK2P29597 1187 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 RMDN2Q96LZ7 410 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 SCAF8Q9UPN6 1271 aaKnown RBP15.32■□□□□ 0.04
CACNB1-206ENST00000539338 MYPNQ86TC9 1320 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
CACNB1-206ENST00000539338 SEC24CP53992 1094 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms