RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CLTAP09496 248 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 SYT1P21579 422 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 RSPO2Q6UXX9 243 aaPredicted RBP24.23■■□□□ 1.47
SCARB1-206ENST00000539320 INTS4Q96HW7 963 aaKnown RBP24.23■■□□□ 1.47
SCARB1-206ENST00000539320 HAPLN2Q9GZV7 340 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 MFSD1Q9H3U5 465 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 TBX20Q9UMR3 447 aa24.23■■□□□ 1.47
SCARB1-206ENST00000539320 CCL16O15467 120 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 PIGRP01833 764 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 FSHRP23945 695 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 VARS2Q5ST30 1063 aaKnown RBP24.22■■□□□ 1.47
SCARB1-206ENST00000539320 AXDND1Q5T1B0 1012 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-206ENST00000539320 GRASPQ7Z6J2 395 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-206ENST00000539320 RSAD2Q8WXG1 361 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 NXPE3Q969Y0 559 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 ZHX3Q9H4I2 956 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 PLEKHA5Q9HAU0 1116 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 TUBGCP4Q9UGJ1 667 aa24.22■■□□□ 1.47
SCARB1-206ENST00000539320 TRAK2O60296 914 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 MARCKSP29966 332 aaPredicted RBP24.21■■□□□ 1.47
SCARB1-206ENST00000539320 ROR1Q01973 937 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 TCF15Q12870 199 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 KYAT1Q16773 422 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 UVSSAQ2YD98 709 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 EPSTI1Q96J88 318 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 FBXO2Q9UK22 296 aaPredicted RBP24.21■■□□□ 1.47
SCARB1-206ENST00000539320 FBXL21Q9UKT6 434 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 POLIQ9UNA4 740 aa24.21■■□□□ 1.47
SCARB1-206ENST00000539320 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.21■■□□□ 1.47
SCARB1-206ENST00000539320 NARSO43776 548 aaKnown RBP24.2■■□□□ 1.46
SCARB1-206ENST00000539320 LAMP2P13473 410 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 ABCD1P33897 745 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 MCM4P33991 863 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 NUBP1P53384 320 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 NTHL1P78549 312 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 PPP2R3AQ06190 1150 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 SPECC1Q5M775 1068 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 SLC8B1Q6J4K2 584 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 FAM173BQ6P4H8 233 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 USP49Q70CQ1 688 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 RTL10Q7L3V2 364 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 ALYREFQ86V81 257 aaKnown RBP24.2■■□□□ 1.46
SCARB1-206ENST00000539320 MAP4K3Q8IVH8 894 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 SUSD3Q96L08 255 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 FIZ1Q96SL8 496 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 STK17AQ9UEE5 414 aa24.2■■□□□ 1.46
SCARB1-206ENST00000539320 ZFP37Q9Y6Q3 630 aaPredicted RBP24.2■■□□□ 1.46
SCARB1-206ENST00000539320 TTC26A0AVF1 554 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 H7C4K7 107 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 K7ELQ4 463 aaPredicted RBP24.19■■□□□ 1.46
SCARB1-206ENST00000539320 OGTO15294 1046 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 TXLNAP40222 546 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 TNFSF9P41273 254 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 HTR4Q13639 388 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 ASTLQ6HA08 431 aaPredicted RBP24.19■■□□□ 1.46
SCARB1-206ENST00000539320 TMEM105Q8N8V8 129 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 KIF12Q96FN5 646 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 CCDC39Q9UFE4 941 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 CDH7Q9ULB5 785 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 UBQLN1Q9UMX0 589 aaKnown RBP24.19■■□□□ 1.46
SCARB1-206ENST00000539320 MTMR6Q9Y217 621 aa24.19■■□□□ 1.46
SCARB1-206ENST00000539320 SRPRBQ9Y5M8 271 aaKnown RBP24.19■■□□□ 1.46
SCARB1-206ENST00000539320 FAM189A1O60320 539 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 NMT1P30419 496 aaKnown RBP24.18■■□□□ 1.46
SCARB1-206ENST00000539320 DDIT3P35638 169 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 MRE11P49959 708 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 SPAG1Q07617 926 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 ZBTB41Q5SVQ8 909 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 CWF19L1Q69YN2 538 aaKnown RBP24.18■■□□□ 1.46
SCARB1-206ENST00000539320 ZNF280DQ6N043 979 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 KRI1Q8N9T8 703 aaKnown RBP24.18■■□□□ 1.46
SCARB1-206ENST00000539320 FOXD4L1Q9NU39 408 aa24.18■■□□□ 1.46
SCARB1-206ENST00000539320 WDR27A2RRH5 827 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 ANHXE9PGG2 379 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 XPOTO43592 962 aaKnown RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 TBC1D4O60343 1298 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 LRPAP1P30533 357 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 GTF2BQ00403 316 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 CEBPZQ03701 1054 aaKnown RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 MRPL58Q14197 206 aaKnown RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 ENOX2Q16206 610 aaKnown RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 SLC39A4Q6P5W5 647 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 SIX5Q8N196 739 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 SLC44A3Q8N4M1 653 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 APPL2Q8NEU8 664 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 FLCNQ8NFG4 579 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 CLIC6Q96NY7 704 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 MSTO1Q9BUK6 570 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 RPF1Q9H9Y2 349 aaKnown RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 FBXL5Q9UKA1 691 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 PCDHB8Q9UN66 801 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 NUMBLQ9Y6R0 609 aa24.17■■□□□ 1.46
SCARB1-206ENST00000539320 MORC2Q9Y6X9 1032 aaPredicted RBP24.17■■□□□ 1.46
SCARB1-206ENST00000539320 A0A0B4J269 797 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 GALR2O43603 387 aaPredicted RBP24.16■■□□□ 1.46
SCARB1-206ENST00000539320 SRFP11831 508 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 CYP3A5P20815 502 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 ELF1P32519 619 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 CLCN5P51795 746 aa24.16■■□□□ 1.46
SCARB1-206ENST00000539320 ARPP19P56211 112 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms