RNA–Protein interactions for RNA: ENST00000539244.6

SS18-204, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-204ENST00000539244 ATF2P15336 505 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 KCNE1P15382 129 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 PTPN2P17706 415 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 PROZP22891 400 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 TARSP26639 723 aaKnown RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 NPTX2P47972 431 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 MRPL58Q14197 206 aaKnown RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 PDIA5Q14554 519 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 PUM1Q14671 1186 aaKnown RBP eCLIP14.89□□□□□ -0.03
SS18-204ENST00000539244 PRSS36Q5K4E3 855 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 TAS1R3Q7RTX0 852 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 TCEAL8Q8IYN2 117 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 DAW1Q8N136 415 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 IGSF22Q8N9C0 903 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 ZBTB44Q8NCP5 570 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 DNASE1L2Q92874 299 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 ELSPBP1Q96BH3 223 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 ZMAT2Q96NC0 199 aaKnown RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 MRPL4Q9BYD3 311 aaKnown RBP14.89□□□□□ -0.03
SS18-204ENST00000539244 PLA2G2FQ9BZM2 168 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 CNTN3Q9P232 1028 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 LRWD1Q9UFC0 647 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 F5P12259 2224 aa14.89□□□□□ -0.03
SS18-204ENST00000539244 PODXLO00592 558 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 ABLIM1O14639 778 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 NCAM2O15394 837 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 EIF5BO60841 1220 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 LILRB5O75023 590 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 LRG1P02750 347 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 MCF2P10911 925 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 CEBPBP17676 345 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 CD72P21854 359 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 FCARP24071 287 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 ELF1P32519 619 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 ZNF568Q3ZCX4 644 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 TPGS2Q68CL5 300 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 TANGO2Q6ICL3 276 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 TPRG1Q6ZUI0 275 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 DGLUCYQ7Z3D6 616 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 DCLK2Q8N568 766 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 MCRS1Q96EZ8 462 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 HINFPQ9BQA5 517 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 C17orf75Q9HAS0 396 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
SS18-204ENST00000539244 MRPS17Q9Y2R5 130 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 PDCD11Q14690 1871 aaKnown RBP14.88□□□□□ -0.03
SS18-204ENST00000539244 COL4A2P08572 1712 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 CCDC169A6NNP5 214 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 H7C4K7 107 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 PEX3P56589 373 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 HMGN5P82970 282 aaKnown RBP14.87□□□□□ -0.03
SS18-204ENST00000539244 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
SS18-204ENST00000539244 FZD5Q13467 585 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 ZNF687Q8N1G0 1237 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 ACAP3Q96P50 834 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 TARS2Q9BW92 718 aaKnown RBP14.87□□□□□ -0.03
SS18-204ENST00000539244 PRMT8Q9NR22 394 aaPredicted RBP14.87□□□□□ -0.03
SS18-204ENST00000539244 HEBP1Q9NRV9 189 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 MAFFQ9ULX9 164 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 INSL5Q9Y5Q6 135 aa14.87□□□□□ -0.03
SS18-204ENST00000539244 MED19A0JLT2 244 aaPredicted RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 PRRG1O14668 218 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 ZNF197O14709 1029 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 MEFVO15553 781 aaPredicted RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 HIP1RO75146 1068 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 OSTNP61366 133 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 CSTF1Q05048 431 aaKnown RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 ADCY1Q08828 1119 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 MAPK7Q13164 816 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 MPZL3Q6UWV2 235 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 MAMSTRQ6ZN01 415 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 CCDC83Q8IWF9 413 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 SNX29Q8TEQ0 813 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 ATRIPQ8WXE1 791 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 SUSD3Q96L08 255 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 DRC1Q96MC2 740 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 CORO1BQ9BR76 489 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 NTPCRQ9BSD7 190 aaKnown RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 FAM126AQ9BYI3 521 aaPredicted RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 RAB34Q9BZG1 259 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 EPC1Q9H2F5 836 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 CYP4F11Q9HBI6 524 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 TRPV5Q9NQA5 729 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 KMT5AQ9NQR1 393 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 FBXL5Q9UKA1 691 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 NOL7Q9UMY1 257 aaKnown RBP14.86□□□□□ -0.03
SS18-204ENST00000539244 DNM3Q9UQ16 869 aa14.86□□□□□ -0.03
SS18-204ENST00000539244 E9PMD0 336 aa14.85□□□□□ -0.03
SS18-204ENST00000539244 LAD1O00515 517 aa14.85□□□□□ -0.03
SS18-204ENST00000539244 SEC24AO95486 1093 aa14.85□□□□□ -0.03
SS18-204ENST00000539244 U2AF2P26368 475 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms