RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 KLRC2P26717 231 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ODF2Q5BJF6 829 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 ST13P5Q8NFI4 369 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 GAS2L1Q99501 681 aaPredicted RBP9.44□□□□□ -0.9
GGA3-202ENST00000538886 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 CRISPLD2Q9H0B8 497 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 IFT122Q9HBG6 1241 aa9.44□□□□□ -0.9
GGA3-202ENST00000538886 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 P4HA1P13674 534 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 RNASE9P60153 205 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 MYL7Q01449 175 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 MBTD1Q05BQ5 628 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 DCAF4L1Q3SXM0 396 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 GUF1Q8N442 669 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 ZSWIM2Q8NEG5 633 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 LRRC15Q8TF66 581 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 DHTKD1Q96HY7 919 aaPredicted RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 ZNF558Q96NG5 402 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 SEPT5Q99719 369 aaPredicted RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 ACO2Q99798 780 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 COLEC11Q9BWP8 271 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 HPSEQ9Y251 543 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 SYNJ2BP-COX16A0A087WUM0 186 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 ABHD14A-ACY1A0A1B0GW23 586 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 A8MXQ7 604 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 URODP06132 367 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 ATP1A3P13637 1013 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 ACAT1P24752 427 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 BRCC3P46736 316 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 LIG3P49916 1009 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 ENGASEQ8NFI3 743 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 DPP3Q9NY33 737 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 COLQQ9Y215 455 aaPredicted RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 PCDHB4Q9Y5E5 795 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 PHLPP2Q6ZVD8 1323 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 LAMA3Q16787 3333 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 IGKV6D-21A0A0A0MT36 114 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 FRMD3A2A2Y4 597 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 HAS3O00219 553 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 RHOBTB3O94955 611 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 RPL17P18621 184 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 PPP1R2P41236 205 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 DNA2P51530 1060 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 SLC8A3P57103 927 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 TARBP2Q15633 366 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 FAM109BQ6ICB4 259 aaPredicted RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 PHLDB2Q86SQ0 1253 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
GGA3-202ENST00000538886 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
GGA3-202ENST00000538886 PIK3R2O00459 728 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 RAB27AP51159 221 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 ARL5CA6NH57 179 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 NFICP08651 508 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ABCD1P33897 745 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ACTN2P35609 894 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 PBX2P40425 430 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 EXOC3L4Q17RC7 722 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 NT5DC1Q5TFE4 455 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 LSM14BQ9BX40 385 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 TSPYL2Q9H2G4 693 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 AGPAT5Q9NUQ2 364 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 FAM49BQ9NUQ9 324 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 GCNT4Q9P109 453 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ZBTB42B2RXF5 422 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 NCOA4Q13772 614 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 SPOPLQ6IQ16 392 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 CCSAPQ6IQ19 270 aaPredicted RBP9.42□□□□□ -0.9
GGA3-202ENST00000538886 ANKRD33Q7Z3H0 272 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ECHDC2Q86YB7 292 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 HPDLQ96IR7 371 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 PDZD7Q9H5P4 517 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 ARFGAP3Q9NP61 516 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 SLC38A7Q9NVC3 462 aa9.42□□□□□ -0.9
GGA3-202ENST00000538886 IRAK4Q9NWZ3 460 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms