RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 HAPLN2Q9GZV7 340 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ACTR5Q9H9F9 607 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 GH1P01241 217 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 CD58P19256 250 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 NF2P35240 595 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ADCY8P40145 1251 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 GCNT1Q02742 428 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 MTERF2Q49AM1 385 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 CYP4X1Q8N118 509 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ANKRD42Q8N9B4 389 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 SPIRE2Q8WWL2 714 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 TMEM143Q96AN5 459 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 WHRNQ9P202 907 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 TMEM120BA0PK00 339 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 HLA-DRAP01903 254 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 CETPP11597 493 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 KCNA2P16389 499 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 DPEP1P16444 411 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 NSFP46459 744 aaKnown RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 PRKCEQ02156 737 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 MPP2Q14168 576 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ATP13A4Q4VNC1 1196 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 LACTB2Q53H82 288 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 FAM133BQ5BKY9 247 aaKnown RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 SAMD3Q8N6K7 520 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 SNF8Q96H20 258 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 CEP89Q96ST8 783 aa12.75□□□□□ -0.37
CPNE8-203ENST00000538596 APOBEC3GQ9HC16 384 aaKnown RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-203ENST00000538596 ZBED4O75132 1171 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 VNN1O95497 513 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 TCF4P15884 667 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 C15orf39Q6ZRI6 1047 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
CPNE8-203ENST00000538596 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 GDAP1Q8TB36 358 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
CPNE8-203ENST00000538596 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 KCNK9Q9NPC2 374 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 ABCF3Q9NUQ8 709 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 ZNF541Q9H0D2 1346 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 ASAP2O43150 1006 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 KCNA3P22001 575 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 GTF2H1P32780 548 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 PIK3CAP42336 1068 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 LIG4P49917 911 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
CPNE8-203ENST00000538596 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
CPNE8-203ENST00000538596 TMEM270Q6UE05 265 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 MON1BQ7L1V2 547 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 SLCO2A1Q92959 643 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 C9orf72Q96LT7 481 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 KDM4CQ9H3R0 1056 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 PDLIM7Q9NR12 457 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 CYP26B1Q9NR63 512 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 FGFR1OP2Q9NVK5 253 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPNE8-203ENST00000538596 ANAPC5Q9UJX4 755 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 PCDHB2Q9Y5E7 798 aa12.74□□□□□ -0.37
CPNE8-203ENST00000538596 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 PI4K2BG5E9Z4 385 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 THAP12O43422 761 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 TTC4O95801 387 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ATF2P15336 505 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ITIH2P19823 946 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 CCND2P30279 289 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 PTK6Q13882 451 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 FNBP1Q96RU3 617 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 C4BPAP04003 597 aaKnown RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 EDN1P05305 212 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 HARSP12081 509 aaKnown RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ACO1P21399 889 aaKnown RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 GARTP22102 1010 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ACTR2P61160 394 aa12.73□□□□□ -0.37
CPNE8-203ENST00000538596 KLF1Q13351 362 aaPredicted RBP12.73□□□□□ -0.37
CPNE8-203ENST00000538596 ZACNQ401N2 412 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms