RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CUL2Q13617 745 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 SLC29A2Q14542 456 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 SGO2Q562F6 1265 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 NLRP14Q86W24 1093 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 CEP89Q96ST8 783 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 PCYT2Q99447 389 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 C11orf70Q9BRQ4 267 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 GSTTP1A0A1W2PQM5 241 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 SMIM23A6NLE4 172 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 PPP1R7Q15435 360 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 SPDYCQ5MJ68 293 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 SLFN12LQ6IEE8 588 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 ZNF677Q86XU0 584 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 CCT8L2Q96SF2 557 aa26.58■■□□□ 1.85
RAB40C-204ENST00000538492 MTRF1LQ9UGC7 380 aaKnown RBP26.58■■□□□ 1.85
RAB40C-204ENST00000538492 TTLL13PA6NNM8 815 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 USP2O75604 605 aaPredicted RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 FGFR4P22455 802 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 BPIFB4P59827 614 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 CENPCQ03188 943 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 VGLL4Q14135 290 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 NOL9Q5SY16 702 aaKnown RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 MYCBPAPQ8TBZ2 947 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 ZNF473Q8WTR7 871 aaKnown RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 ATG4AQ8WYN0 398 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 PLVAPQ9BX97 442 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 AVENQ9NQS1 362 aaPredicted RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 WDR90Q96KV7 1748 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 PASKQ96RG2 1323 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 A0A0B4J269 797 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 TLDC2A0PJX2 215 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 ECEL1O95672 775 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 CYP1A1P04798 512 aaPredicted RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 CAPSQ13938 189 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 HERPUD2Q9BSE4 406 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 NIFKQ9BYG3 293 aaKnown RBP26.57■■□□□ 1.84
RAB40C-204ENST00000538492 TSPYL1Q9H0U9 437 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 PARP2Q9UGN5 583 aa26.57■■□□□ 1.84
RAB40C-204ENST00000538492 FSCN2O14926 492 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 FARP2O94887 1054 aaPredicted RBP26.56■■□□□ 1.84
RAB40C-204ENST00000538492 PIGRP01833 764 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 NUDT17P0C025 328 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 GNA15P30679 374 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 FNTAP49354 379 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 MON1BQ7L1V2 547 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 LRRC19Q9H756 370 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 NUB1Q9Y5A7 615 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 SNCAIPQ9Y6H5 919 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 O00370 1275 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 LBX2Q6XYB7 198 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 C12orf50Q8NA57 414 aaPredicted RBP26.56■■□□□ 1.84
RAB40C-204ENST00000538492 CHST7Q9NS84 486 aa26.56■■□□□ 1.84
RAB40C-204ENST00000538492 IGKV6D-21A0A0A0MT36 114 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 NOP14P78316 857 aaKnown RBP26.55■■□□□ 1.84
RAB40C-204ENST00000538492 SH3D19Q5HYK7 790 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 CCDC25Q86WR0 208 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 NCAPG2Q86XI2 1143 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 LOC285556D6RIA3 1793 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 LDHAP00338 332 aaKnown RBP26.55■■□□□ 1.84
RAB40C-204ENST00000538492 MYBL1P10243 752 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 GBP1P32455 592 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 MAGEA9P43362 315 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 STAT5BP51692 787 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 HOOK3Q86VS8 718 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 ART4Q93070 314 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 TRIM11Q96F44 468 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 CGRRF1Q99675 332 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 CNTNAP2Q9UHC6 1331 aa26.55■■□□□ 1.84
RAB40C-204ENST00000538492 TNFSF9P41273 254 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 KRT17Q04695 432 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 ZBTB33Q86T24 672 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 RBBP8NLQ8NC74 664 aaPredicted RBP26.54■■□□□ 1.84
RAB40C-204ENST00000538492 RUNDC3BQ96NL0 473 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 ADAM22Q9P0K1 906 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 ADGRA2Q96PE1 1338 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 SIP14410 1827 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 SOWAHBA6NEL2 793 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 CLTAP09496 248 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 HEMGNQ9BXL5 484 aa26.54■■□□□ 1.84
RAB40C-204ENST00000538492 FAM107AO95990 144 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 TCF7P36402 384 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 NOMO3P69849 1222 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 MMS22LQ6ZRQ5 1243 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 B4GALNT4Q76KP1 1039 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 CCDC50Q8IVM0 306 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 ABRAQ8N0Z2 381 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 PRPF31Q8WWY3 499 aaKnown RBP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 TLCD1Q96CP7 247 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 R3HDMLQ9H3Y0 253 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 NRBP2Q9NSY0 501 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 THAP12O43422 761 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 GJB6O95452 261 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 MARK3P27448 753 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 CALCOCO2Q13137 446 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 NCOA4Q13772 614 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 TARBP2Q15633 366 aaKnown RBP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 LY6KQ17RY6 165 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 MDM1Q8TC05 714 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 DDX27Q96GQ7 796 aaKnown RBP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 TCHPQ9BT92 498 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms