RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PTDSS1P48651 473 aaKnown RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 POLGP54098 1239 aaPredicted RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 ASIC1P78348 528 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 XIAPP98170 497 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 IL9RQ01113 521 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 DR1Q01658 176 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 TROAPQ12815 778 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PABPC4Q13310 644 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP28-207ENST00000538475 IFIT5Q13325 482 aaKnown RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 LSAMPQ13449 338 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 AUHQ13825 339 aaKnown RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 RAPGEF1Q13905 1077 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 IL17AQ16552 155 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 USH1GQ495M9 461 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SLC45A4Q5BKX6 768 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PHLDB3Q6NSJ2 640 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 LRRC55Q6ZSA7 311 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SV2BQ7L1I2 683 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 CABP7Q86V35 215 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PASD1Q8IV76 773 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 IFNL2Q8IZJ0 200 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SPICE1Q8N0Z3 855 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 ANKRD35Q8N283 1001 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 NME8Q8N427 588 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 FITM2Q8N6M3 262 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 USHBP1Q8N6Y0 703 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 OR2W6PQ8NHA6 318 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 WDR66Q8TBY9 1149 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MDM1Q8TC05 714 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 LRRC8CQ8TDW0 803 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 CTNNBL1Q8WYA6 563 aaPredicted RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 TBC1D5Q92609 795 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 STAMQ92783 540 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SLCO2A1Q92959 643 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PPP2R3CQ969Q6 453 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 NACC1Q96RE7 527 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PSMB7Q99436 277 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 NDNQ99608 321 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 CCDC77Q9BR77 488 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 LZTS2Q9BRK4 669 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 FAM167BQ9BTA0 163 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MYL10Q9BUA6 226 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MXD3Q9BW11 206 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 RAB34Q9BZG1 259 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 NEUROG2Q9H2A3 272 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 TMEM60Q9H2L4 133 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SEMA6BQ9H3T3 888 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 FAM207AQ9NSI2 230 aaPredicted RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 CCDC87Q9NVE4 849 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SMARCAL1Q9NZC9 954 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SENP1Q9P0U3 644 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PPP1R1BQ9UD71 204 aaPredicted RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 BLOC1S6Q9UL45 172 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP28-207ENST00000538475 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 WDR37Q9Y2I8 494 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 AMOTL2Q9Y2J4 779 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 ATP8A1Q9Y2Q0 1164 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 COL4A3BPQ9Y5P4 624 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 FRMPD4Q14CM0 1322 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SYNGAP1Q96PV0 1343 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 TNRC6CQ9HCJ0 1690 aaKnown RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 COL18A1P39060 1754 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 LAMB2P55268 1798 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MAST2Q6P0Q8 1798 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 A0A0A0MRY4 1105 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 CCDC194A0A1B0GVG4 234 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 GTPBP10A4D1E9 387 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 SIGLEC16A6NMB1 481 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 DCDC2CA8MYV0 355 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TCP11X1B4DZS4 312 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 F8W8V4 182 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 NDC80O14777 642 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TLR2O60603 784 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 PHF2O75151 1096 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 NOL4O94818 638 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 TTLL1O95922 423 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 GAS8O95995 478 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 AFPP02771 609 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 ATP5BP06576 529 aaKnown RBP7.15□□□□□ -1.26
USP28-207ENST00000538475 ALAS1P13196 640 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 SLC5A1P13866 664 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MPSTP25325 297 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 GSTT1P30711 240 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ABCD1P33897 745 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MCM7P33993 719 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 KLK7P49862 253 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 SERPINB8P50452 374 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 SLC34A1Q06495 639 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 SULT2A1Q06520 285 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 AP1B1Q10567 949 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 STK4Q13043 487 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 MAPK7Q13164 816 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 RASA2Q15283 850 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 GRIK4Q16099 956 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 ADRM1Q16186 407 aa7.15□□□□□ -1.26
USP28-207ENST00000538475 CYP1B1Q16678 543 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms