RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FBXL18Q96ME1 805 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 CBWD1Q9BRT8 395 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
SPARC-208ENST00000538026 EPHX3Q9H6B9 360 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 PLEKHA5Q9HAU0 1116 aa9.16□□□□□ -0.94
SPARC-208ENST00000538026 MRPL17Q9NRX2 175 aaKnown RBP9.16□□□□□ -0.94
SPARC-208ENST00000538026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 CARNS1A5YM72 827 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 LOC730098B7Z3J9 87 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 TNFRSF10AO00220 468 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 PODXLO00592 558 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 TGM5O43548 720 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 RFPL2O75678 378 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 GCNT3O95395 438 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 SCP2P22307 547 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 KLRC2P26717 231 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 LRPAP1P30533 357 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 KRT85P78386 507 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 BECN1Q14457 450 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 PUS10Q3MIT2 529 aaKnown RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 SPATA1Q5VX52 437 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 JADE1Q6IE81 842 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 POTEHQ6S545 545 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 TMC5Q6UXY8 1006 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 UNC13DQ70J99 1090 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 ADHFE1Q8IWW8 467 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 GPR65Q8IYL9 337 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 GJD3Q8N144 294 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 KIAA0895Q8NCT3 520 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 PIK3R5Q8WYR1 880 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 ZNF707Q96C28 371 aaPredicted RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 HVCN1Q96D96 273 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 SAAL1Q96ER3 474 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 BORCS6Q96GS4 357 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 ACCSQ96QU6 501 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 TTPALQ9BTX7 342 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 ADAM7Q9H2U9 754 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 C11orf16Q9NQ32 467 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 TOPORSQ9NS56 1045 aaPredicted RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 FNIP2Q9P278 1114 aa9.15□□□□□ -0.94
SPARC-208ENST00000538026 AGO2Q9UKV8 859 aaKnown RBP9.15□□□□□ -0.94
SPARC-208ENST00000538026 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.953e-6■■■■■ 137.9
SPARC-208ENST00000538026 PTPRJQ12913 1337 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 ZNF318Q5VUA4 2279 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 A0A1W2PQ27 194 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 A0A1W2PQ64 194 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 A0A1W2PQD8 194 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 ANO9A1A5B4 782 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 PIRO00625 290 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 NR1I2O75469 434 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 VNN2O95498 520 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 URODP06132 367 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 HOXB8P17481 243 aaPredicted RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 RPL9P32969 192 aaKnown RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 CA8P35219 290 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 MATR3P43243 847 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPARC-208ENST00000538026 AARSP49588 968 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPARC-208ENST00000538026 ASIC1P78348 528 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 STK4Q13043 487 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 SNW1Q13573 536 aaKnown RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 CBX2Q14781 532 aaPredicted RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 RARS2Q5T160 578 aaKnown RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 APBB1IPQ7Z5R6 666 aaPredicted RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 GLYCTKQ8IVS8 523 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 ENGASEQ8NFI3 743 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 CASP10Q92851 521 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 UROC1Q96N76 676 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 PCIF1Q9H4Z3 704 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 POMKQ9H5K3 350 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 RPF1Q9H9Y2 349 aaKnown RBP9.14□□□□□ -0.95
SPARC-208ENST00000538026 MAN1C1Q9NR34 630 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 PCDHB13Q9Y5F0 798 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 TSC2P49815 1807 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
SPARC-208ENST00000538026 M0QZQ0 153 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 NRG2O14511 850 aaPredicted RBP9.13□□□□□ -0.95
SPARC-208ENST00000538026 N4BP1O75113 896 aaKnown RBP9.13□□□□□ -0.95
SPARC-208ENST00000538026 CYP3A5P20815 502 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 GARTP22102 1010 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 DPYDQ12882 1025 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 PSMD5Q16401 504 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 BMT2Q1RMZ1 405 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 TPRNQ4KMQ1 711 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 FAM26FQ5R3K3 315 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 VARS2Q5ST30 1063 aaKnown RBP9.13□□□□□ -0.95
SPARC-208ENST00000538026 C9orf57Q5W0N0 161 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 SLFN12LQ6IEE8 588 aa9.13□□□□□ -0.95
SPARC-208ENST00000538026 KIAA1841Q6NSI8 718 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms