RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CREMQ03060 361 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 C15orf39Q6ZRI6 1047 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SPATA31D4Q6ZUB0 917 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CMASQ8NFW8 434 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DDX27Q96GQ7 796 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 STRA6Q9BX79 667 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 A0A0B4J269 797 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FRMD3A2A2Y4 597 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TISP43B9A030 160 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ANKRD63C9JTQ0 380 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 I3L4J1 428 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 OGTO15294 1046 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 RFPL2O75678 378 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CMA1P23946 247 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 E2F4Q16254 413 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 RESP18Q5W5W9 173 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TMEM130Q8N3G9 435 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PLEKHA5Q9HAU0 1116 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SEL1LQ9UBV2 794 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DPP7Q9UHL4 492 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 C2CD4DB7Z1M9 353 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ADAM12O43184 909 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PAPLNO95428 1278 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TKTP29401 623 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SPAG1Q07617 926 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 HDAC7Q8WUI4 952 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MSTO1Q9BUK6 570 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 IKZF4Q9H2S9 585 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PLEKHA4Q9H4M7 779 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TBC1D7Q9P0N9 293 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TUBGCP4Q9UGJ1 667 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 NR2E1Q9Y466 385 aa19.46■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ZNF318Q5VUA4 2279 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 NOTCH4Q99466 2003 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CCDC195A0A1B0GUA6 201 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ADRB2P07550 413 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 GAP43P17677 238 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 COL9A1P20849 921 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RPL9P32969 192 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KCNA1Q09470 495 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZBTB6Q15916 424 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KYAT1Q16773 422 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PDXDC1Q6P996 788 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KREMEN2Q8NCW0 462 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 STAMQ92783 540 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 HVCN1Q96D96 273 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 MRPL44Q9H9J2 332 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 OLFML3Q9NRN5 406 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 STYXL1Q9Y6J8 313 aa19.45■□□□□ 0.7
TNFRSF1A-209ENST00000536717 LACTBL1A8MY62 500 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TRAPPC3O43617 180 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 IDEP14735 1019 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RSPO2Q6UXX9 243 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZNF707Q96C28 371 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PYM1Q9BRP8 204 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 FGFBP2Q9BYJ0 223 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RHOBTB2Q9BYZ6 727 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KBTBD4Q9NVX7 518 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 MTRRQ9UBK8 725 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 FBXW11Q9UKB1 542 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CPSF3Q9UKF6 684 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 USTQ9Y2C2 406 aa19.44■□□□□ 0.7
TNFRSF1A-209ENST00000536717 GOLGA6L22H0YM25 854 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CASP5P51878 434 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PPP2R3AQ06190 1150 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CCDC149Q6ZUS6 474 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 FSIP1Q8NA03 581 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KIF12Q96FN5 646 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TNMDQ9H2S6 317 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RPF1Q9H9Y2 349 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RAPGEFL1Q9UHV5 662 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 KCNH3Q9ULD8 1083 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZDBF2Q9HCK1 2354 aa19.43■□□□□ 0.7
TNFRSF1A-209ENST00000536717 A0A1B0GVL5 298 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PRR33A8MZF0 331 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PFKFB1P16118 471 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ADSSP30520 456 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 LRPAP1P30533 357 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 RAB33AQ14088 237 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 SLFN12LQ6IEE8 588 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ANKS3Q6ZW76 656 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 IQUBQ8NA54 791 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 EDAQ92838 391 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 DHX58Q96C10 678 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CUEDC2Q9H467 287 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PANK4Q9NVE7 773 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZDHHC7Q9NXF8 308 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 UBQLN1Q9UMX0 589 aaKnown RBP19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 NUB1Q9Y5A7 615 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 BACE2Q9Y5Z0 518 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CDY1Q9Y6F8 540 aa19.42■□□□□ 0.7
TNFRSF1A-209ENST00000536717 SYN3O14994 580 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PRPF40AO75400 957 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZMYND10O75800 440 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms