RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SLC30A5Q8TAD4 765 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SLC35G2Q8TBE7 412 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MAIP1Q8WWC4 291 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 CKAP2Q8WWK9 683 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 RPS6KC1Q96S38 1066 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MKNK1Q9BUB5 465 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PLVAPQ9BX97 442 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 CCDC113Q9H0I3 377 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 WNT8AQ9H1J5 351 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SLC24A3Q9HC58 644 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ABCF3Q9NUQ8 709 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 GRHL1Q9NZI5 618 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 TBC1D7Q9P0N9 293 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 GCNT4Q9P109 453 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 KLHL14Q9P2G3 628 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 KIAA1024Q9UPX6 916 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 UBE4BO95155 1302 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 DDTLA6NHG4 134 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 SMIM23A6NLE4 172 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 KBTBD13C9JR72 458 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 HNRNPCL1O60812 293 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 TBCAO75347 108 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 NR3C1P04150 777 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CLTBP09497 229 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CCNB1P14635 433 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 VCAM1P19320 739 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 PSMC2P35998 433 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 IFNAR2P48551 515 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CDK8P49336 464 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 RASSF2P50749 326 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 RWDD2BP57060 319 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 IFI35P80217 286 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 MRPS35P82673 323 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 EVX2Q03828 476 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 STRN3Q13033 797 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CYP1B1Q16678 543 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 MIS18BP1Q6P0N0 1132 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ARRDC4Q8NCT1 418 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 GPRC5AQ8NFJ5 357 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 LNX1Q8TBB1 728 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 SH3RF3Q8TEJ3 882 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ART4Q93070 314 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 MAGEB18Q96M61 343 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ZNF570Q96NI8 536 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 APBA2Q99767 749 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CCDC77Q9BR77 488 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 NKX2-4Q9H2Z4 354 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ZHX3Q9H4I2 956 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 SIX2Q9NPC8 291 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 NKIRAS1Q9NYS0 192 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 WHRNQ9P202 907 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ZFATQ9P243 1243 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 CPSF2Q9P2I0 782 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 RBPJLQ9UBG7 517 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 AGAP1Q9UPQ3 857 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 YBX2Q9Y2T7 364 aaKnown RBP8.3□□□□□ -1.08
CPSF7-216ENST00000536548 ACTL7BQ9Y614 415 aa8.3□□□□□ -1.08
CPSF7-216ENST00000536548 LRRD1A4D1F6 860 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 TCP11X1B4DZS4 312 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 E9PMD0 336 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 RFXAPO00287 272 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 KIAA0355O15063 1070 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 TBX3O15119 743 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PQBP1O60828 265 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 TCEA3O75764 348 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 EYA4O95677 639 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 FESP07332 822 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ALDH3A1P30838 453 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 MAPK4P31152 587 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 STX2P32856 288 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 CCNHP51946 323 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SLC12A3P55017 1021 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 KCNJ2P63252 427 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 IL9RQ01113 521 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 NR1H3Q13133 447 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
CPSF7-216ENST00000536548 SPDYAQ5MJ70 313 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 ANKRD20A2Q5SQ80 823 aa8.29□□□□□ -1.08
CPSF7-216ENST00000536548 WASHC2DQ5SRD0 308 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms