RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 BICD1Q96G01 975 aa16.78■□□□□ 0.28
PAAF1-207ENST00000536003 SLC38A7Q9NVC3 462 aa16.78■□□□□ 0.28
PAAF1-207ENST00000536003 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
PAAF1-207ENST00000536003 DUSP12Q9UNI6 340 aa16.78■□□□□ 0.28
PAAF1-207ENST00000536003 CLDN3O15551 220 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 SLC26A4O43511 780 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 RAB33AQ14088 237 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 VARS2Q5ST30 1063 aaKnown RBP16.77■□□□□ 0.27
PAAF1-207ENST00000536003 CWF19L1Q69YN2 538 aaKnown RBP16.77■□□□□ 0.27
PAAF1-207ENST00000536003 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 MYCT1Q8N699 235 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.27
PAAF1-207ENST00000536003 HCFC1R1Q9NWW0 138 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 TBX20Q9UMR3 447 aa16.77■□□□□ 0.27
PAAF1-207ENST00000536003 HNRNPDLO14979 420 aaKnown RBP16.76■□□□□ 0.27
PAAF1-207ENST00000536003 FAM13AO94988 1023 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
PAAF1-207ENST00000536003 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
PAAF1-207ENST00000536003 PPM1LQ5SGD2 360 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
PAAF1-207ENST00000536003 PDXDC1Q6P996 788 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 KCNN1Q92952 543 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 CLIC6Q96NY7 704 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 IKZF4Q9H2S9 585 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 PARVGQ9HBI0 331 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
PAAF1-207ENST00000536003 BACE2Q9Y5Z0 518 aa16.76■□□□□ 0.27
PAAF1-207ENST00000536003 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 WDR27A2RRH5 827 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 TISP43B9A030 160 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 LAMP2P13473 410 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 PDCP20941 246 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
PAAF1-207ENST00000536003 LIG4P49917 911 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 GUCY2FP51841 1108 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 ROR1Q01973 937 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 ANKS3Q6ZW76 656 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 ZHX3Q9H4I2 956 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 FAM86C1Q9NVL1 165 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 POLIQ9UNA4 740 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
PAAF1-207ENST00000536003 ZFHX2Q9C0A1 2572 aaPredicted RBP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 TRAK2O60296 914 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 PIGRP01833 764 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 KRT18P05783 430 aaKnown RBP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 NPR3P17342 541 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 FSHRP23945 695 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 HOXA9P31269 272 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 HTR4Q13639 388 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 ZC2HC1CQ53FD0 456 aaPredicted RBP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 SLC8B1Q6J4K2 584 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 ITFG1Q8TB96 612 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 NUB1Q9Y5A7 615 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 NUMBLQ9Y6R0 609 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 SCN1AP35498 2009 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 FRYLO94915 3013 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 H0YCG3 227 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 TBCAO75347 108 aaKnown RBP16.74■□□□□ 0.27
PAAF1-207ENST00000536003 CFHP08603 1231 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 MCM4P33991 863 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 MRE11P49959 708 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 PTPN5P54829 565 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 SIX5Q8N196 739 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 SLC44A3Q8N4M1 653 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 FGF14Q92915 247 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
PAAF1-207ENST00000536003 A0A087X0B3 334 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 LACTBL1A8MY62 500 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 ANHXE9PGG2 379 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 PPEF2O14830 753 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 CLTAP09496 248 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
PAAF1-207ENST00000536003 SLC5A9Q2M3M2 681 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 FLCNQ8NFG4 579 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 FGF13Q92913 245 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
PAAF1-207ENST00000536003 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 RPP25Q9BUL9 199 aaKnown RBP16.73■□□□□ 0.27
PAAF1-207ENST00000536003 MFSD1Q9H3U5 465 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 DNMT3BQ9UBC3 853 aaKnown RBP16.73■□□□□ 0.27
PAAF1-207ENST00000536003 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
PAAF1-207ENST00000536003 TCHHQ07283 1943 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 A0A0B4J269 797 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 KRBA1A5PL33 1030 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
PAAF1-207ENST00000536003 SYN3O14994 580 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 PI15O43692 258 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 XYLBO75191 536 aa16.72■□□□□ 0.27
PAAF1-207ENST00000536003 ABLIM3O94929 683 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms