RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CKBP12277 381 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 OSMP13725 252 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 GPR3P46089 330 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 VAV2P52735 878 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 ATXN1P54253 815 aaKnown RBP6.37□□□□□ -1.39
VBP1-203ENST00000535916 TMPRSS15P98073 1019 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 MGAT2Q10469 447 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 FOXR2Q6PJQ5 311 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 ARHGEF25Q86VW2 580 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 AFAP1L2Q8N4X5 818 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 OR2I1PQ8NGU4 316 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 ACTRT2Q8TDY3 377 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 PTCD3Q96EY7 689 aaKnown RBP6.37□□□□□ -1.39
VBP1-203ENST00000535916 SEMA4GQ9NTN9 838 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 CCM2LQ9NUG4 571 aaPredicted RBP6.37□□□□□ -1.39
VBP1-203ENST00000535916 DNAJC28Q9NX36 388 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 HSFX1Q9UBD0 423 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 PCDHGA2Q9Y5H1 932 aa6.37□□□□□ -1.39
VBP1-203ENST00000535916 TEX33O43247 280 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 NOMO3P69849 1222 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 MTM1Q13496 603 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 GEN1Q17RS7 908 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 NOMO2Q5JPE7 1267 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 LHFPL2Q6ZUX7 228 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.36□□□□□ -1.39
VBP1-203ENST00000535916 CCHCR1Q8TD31 782 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 ZNF384Q8TF68 577 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 PDLIM2Q96JY6 352 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 KCTD5Q9NXV2 234 aa6.36□□□□□ -1.39
VBP1-203ENST00000535916 TCRBV7S2A1N4TA0A589 114 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 CDHR4A6H8M9 788 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 LRRC3CA6NJW4 275 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 INO80B-WBP1J3KQ70 363 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 ERN1O75460 977 aaKnown RBP6.35□□□□□ -1.39
VBP1-203ENST00000535916 AMY1AP04745 511 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 CDK4P11802 303 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 SLC5A3P53794 718 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
VBP1-203ENST00000535916 ZGPATQ8N5A5 531 aaKnown RBP6.35□□□□□ -1.39
VBP1-203ENST00000535916 CHAC2Q8WUX2 184 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 AHCYL2Q96HN2 611 aaKnown RBP6.35□□□□□ -1.39
VBP1-203ENST00000535916 INO80BQ9C086 356 aaPredicted RBP6.35□□□□□ -1.39
VBP1-203ENST00000535916 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
VBP1-203ENST00000535916 MYADML2A6NDP7 307 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 PRKD3O94806 890 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 ALAS1P13196 640 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 MTNR1BP49286 362 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 RGS19P49795 217 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 NHLH1Q02575 133 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 NPM2Q86SE8 214 aaKnown RBP6.34□□□□□ -1.39
VBP1-203ENST00000535916 GLCCI1Q86VQ1 547 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 LNX2Q8N448 690 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 SSH3Q8TE77 659 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 NUP133Q8WUM0 1156 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 KLK15Q9H2R5 256 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 GSTO2Q9H4Y5 243 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 DMTF1Q9Y222 760 aa6.34□□□□□ -1.39
VBP1-203ENST00000535916 FAM171A2A8MVW0 826 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 RBMXL2O75526 392 aaKnown RBP6.33□□□□□ -1.4
VBP1-203ENST00000535916 EYA4O95677 639 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.33□□□□□ -1.4
VBP1-203ENST00000535916 COLGALT2Q8IYK4 626 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 TBC1D15Q8TC07 691 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 CYFIP2Q96F07 1278 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 PNKPQ96T60 521 aa6.33□□□□□ -1.4
VBP1-203ENST00000535916 KIAA0391O15091 583 aaKnown RBP6.32□□□□□ -1.4
VBP1-203ENST00000535916 FCER1AP12319 257 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 DDCP20711 480 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 MASP1P48740 699 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 ATP8B2P98198 1209 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 FAPQ12884 760 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 CT47A1Q5JQC4 288 aaPredicted RBP6.32□□□□□ -1.4
VBP1-203ENST00000535916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.32□□□□□ -1.4
VBP1-203ENST00000535916 Q8NA96 180 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 DPF2Q92785 391 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 SLC2A13Q96QE2 648 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
VBP1-203ENST00000535916 IL17RBQ9NRM6 502 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 ASB6Q9NWX5 421 aa6.32□□□□□ -1.4
VBP1-203ENST00000535916 MYBBP1AQ9BQG0 1328 aaKnown RBP6.31□□□□□ -1.4
VBP1-203ENST00000535916 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 KRTAP10-11P60412 298 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 FOXF2Q12947 444 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
VBP1-203ENST00000535916 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 MED15Q96RN5 788 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 MANSC1Q9H8J5 431 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 GPR45Q9Y5Y3 372 aa6.31□□□□□ -1.4
VBP1-203ENST00000535916 PEX1O43933 1283 aa6.3□□□□□ -1.4
VBP1-203ENST00000535916 PAPD7Q5XG87 772 aaKnown RBP6.3□□□□□ -1.4
VBP1-203ENST00000535916 DCBLD1Q8N8Z6 715 aa6.3□□□□□ -1.4
VBP1-203ENST00000535916 HEPHQ9BQS7 1158 aa6.3□□□□□ -1.4
VBP1-203ENST00000535916 GPR39O43194 453 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 SLC6A4P31645 630 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 ERVK-21P61565 698 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 CREMQ03060 361 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms