RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FNIP2Q9P278 1114 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 STK17AQ9UEE5 414 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 TBX20Q9UMR3 447 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 DMDP11532 3685 aa9.67□□□□□ -0.86
CHD4-204ENST00000535810 TRIP11Q15643 1979 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 A0A087X0B3 334 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 CLDN3O15551 220 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 TGM5O43548 720 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 TRAK2O60296 914 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 B3GAT3O94766 335 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 PIGRP01833 764 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 HSP90AA1P07900 732 aaKnown RBP9.66□□□□□ -0.86
CHD4-204ENST00000535810 RPL17P18621 184 aaKnown RBP9.66□□□□□ -0.86
CHD4-204ENST00000535810 MTHFRP42898 656 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 CREMQ03060 361 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 ELAVL2Q12926 359 aaKnown RBP9.66□□□□□ -0.86
CHD4-204ENST00000535810 UPP1Q16831 310 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 SEZ6Q53EL9 994 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 ATAT1Q5SQI0 421 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 RRAGBQ5VZM2 374 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 PRSS55Q6UWB4 352 aaPredicted RBP9.66□□□□□ -0.86
CHD4-204ENST00000535810 CD300LGQ6UXG3 332 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 GPR149Q86SP6 731 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 LINC00301Q8NCQ3 95 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 PIK3R5Q8WYR1 880 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 BICD1Q96G01 975 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 UROC1Q96N76 676 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 ACAP3Q96P50 834 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
CHD4-204ENST00000535810 TTPALQ9BTX7 342 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 ZHX3Q9H4I2 956 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 SLC38A7Q9NVC3 462 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 CACNA1HO95180 2353 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 VWA8A3KMH1 1905 aa9.66□□□□□ -0.86
CHD4-204ENST00000535810 CITO14578 2027 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 MYH15Q9Y2K3 1946 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 MYMKA6NI61 221 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 C2CD4DB7Z1M9 353 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PODXLO00592 558 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 FAM189A1O60320 539 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 GFRA3O60609 400 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 C1RP00736 705 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 SPATA31D3P0C874 917 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 ZSCAN22P10073 491 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 CXCL8P10145 99 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 FGFR3P22607 806 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 NMT1P30419 496 aaKnown RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 STAT6P42226 847 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 LIG4P49917 911 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 GTF2BQ00403 316 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PKP1Q13835 747 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 STK38Q15208 465 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PSMD5Q16401 504 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 ZBTB41Q5SVQ8 909 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 SLC39A4Q6P5W5 647 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 DCLRE1AQ6PJP8 1040 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 C15orf39Q6ZRI6 1047 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 CCDC73Q6ZRK6 1079 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 SPATA31D4Q6ZUB0 917 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 ERMP1Q7Z2K6 904 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 BMP8AQ7Z5Y6 402 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 CEP57Q86XR8 500 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PALB2Q86YC2 1186 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 PRSS33Q8NF86 280 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 CMASQ8NFW8 434 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 LNX1Q8TBB1 728 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 C18orf25Q96B23 403 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 ZNF396Q96N95 335 aaPredicted RBP9.65□□□□□ -0.86
CHD4-204ENST00000535810 CLSTN3Q9BQT9 956 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 ST6GALNAC4Q9H4F1 302 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 TUBGCP4Q9UGJ1 667 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 DPP7Q9UHL4 492 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 NR2E1Q9Y466 385 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 DENND4AQ7Z401 1863 aa9.65□□□□□ -0.86
CHD4-204ENST00000535810 A0A0B4J269 797 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 TTC26A0AVF1 554 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 I3L4J1 428 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 SPTLC2O15270 562 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 ADAM12O43184 909 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PPP6R2O75170 966 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 RFPL2O75678 378 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PAPLNO95428 1278 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 YEATS4O95619 227 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 F13A1P00488 732 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 CLTAP09496 248 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 MYBP10242 640 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PDIA4P13667 645 aaKnown RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 TKTP29401 623 aaKnown RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 ABCD1P33897 745 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 TNFSF9P41273 254 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms