RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MGAT5BQ3V5L5 792 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SV2CQ496J9 727 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SHC4Q6S5L8 630 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 FBXL5Q9UKA1 691 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 MBD5Q9P267 1494 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SCARF1Q14162 830 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 KIZQ2M2Z5 673 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SDE2Q6IQ49 451 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SYDE1Q6ZW31 735 aaPredicted RBP19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 RFWD2Q8NHY2 731 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 ELMO2Q96JJ3 720 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SH2D3AQ9BRG2 576 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 WWP1Q9H0M0 922 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 IL18RAPO95256 599 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 P3H1Q32P28 736 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 LATS2Q9NRM7 1088 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 NYAP2Q9P242 653 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
SFSWAP-203ENST00000535236 KRT4P19013 534 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 HDAC4P56524 1084 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 MAP3K10Q02779 954 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 SLC25A27O95847 323 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 UGP2Q16851 508 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 GRAMD4Q6IC98 578 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 DHX40Q8IX18 779 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 MARCH10Q8NA82 808 aaPredicted RBP19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 RBBP8NLQ8NC74 664 aaPredicted RBP19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 COG1Q8WTW3 980 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 PTPRN2Q92932 1015 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 SYCP2LQ5T4T6 812 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 ICA1LQ8NDH6 482 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 SLC30A5Q8TAD4 765 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 RALBP11234 206 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 FGFR4P22455 802 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 STK33Q9BYT3 514 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 ECT2Q9H8V3 914 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 UVRAGQ9P2Y5 699 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 ARHGAP26Q9UNA1 814 aa19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 SNRNP35Q16560 246 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-203ENST00000535236 FOXN1O15353 648 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 OR1G1P47890 313 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 ATP6V1G3Q96LB4 118 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 GGA3Q9NZ52 723 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 KCND2Q9NZV8 630 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 APRTP07741 180 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 PCSK1P29120 753 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 PPP3CCP48454 512 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 ZFYVE19Q96K21 471 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 REEP2Q9BRK0 252 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 PKP3Q9Y446 797 aa19.08■□□□□ 0.65
SFSWAP-203ENST00000535236 TBX3O15119 743 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 GUCY1A2P33402 732 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 KRT35Q92764 455 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 GRAMD1AQ96CP6 724 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 PPP1R36Q96LQ0 422 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 MCEEQ96PE7 176 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 LIMA1Q9UHB6 759 aaKnown RBP19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 TARSL2A2RTX5 802 aaKnown RBP19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 FOXP2O15409 715 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 CYP2C9P11712 490 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 MMS22LQ6ZRQ5 1243 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 AMACRQ9UHK6 382 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 AURKCQ9UQB9 309 aa19.08■□□□□ 0.64
SFSWAP-203ENST00000535236 CHGBP05060 677 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 PRKCEQ02156 737 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 NBPF9Q3BBW0 867 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ATF7IP2Q5U623 682 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ETNK1Q9HBU6 452 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ALG13Q9NP73 1137 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ACADSBP45954 432 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 RAP1GDS1P52306 607 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 PIGHQ14442 188 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 B4GALNT2Q8NHY0 566 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 PPP1R2P1Q96PQ5 205 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 TRIM9Q9C026 710 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CATSPERBQ9H7T0 1116 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CCL15-CCL14A0A0B4J2E2 113 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ATP1A1P05023 1023 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CETPP11597 493 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 DMTNQ08495 405 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 USP10Q14694 798 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CCDC85BQ15834 202 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CCL15Q16663 113 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 AARS2Q5JTZ9 985 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CDC42EP5Q6NZY7 148 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 NLRP14Q86W24 1093 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 GPRC5AQ8NFJ5 357 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 SCFD2Q8WU76 684 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ARHGEF26Q96DR7 871 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 ALDH8A1Q9H2A2 487 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 TRABDQ9H4I3 376 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 TMEM161AQ9NX61 479 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CCDC78A2IDD5 438 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 HSPA9P38646 679 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 NT5C1AQ9BXI3 368 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 FAM129AQ9BZQ8 928 aa19.07■□□□□ 0.64
SFSWAP-203ENST00000535236 CCSER1Q9C0I3 900 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms