RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 O00370 1275 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 IL1R1P14778 569 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 KRT4P19013 534 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 SLC8A3P57103 927 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 BASP1P80723 227 aaKnown RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 ZNF268Q14587 947 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 KIF22Q14807 665 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 Q4G0T1 1027 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 PYROXD1Q8WU10 500 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 MAGEB18Q96M61 343 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 EXOC7Q9UPT5 735 aa16.87■□□□□ 0.29
MCF2L-232ENST00000535094 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
MCF2L-232ENST00000535094 DCTN3O75935 186 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 FOXN2P32314 431 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 PSEN1P49768 467 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 CRELD2Q6UXH1 353 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-232ENST00000535094 HSD17B14Q9BPX1 270 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 YWHAGP61981 247 aaKnown RBP eCLIP16.86■□□□□ 0.29
MCF2L-232ENST00000535094 HIPK4Q8NE63 616 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 LENG9Q96B70 501 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 KREMEN1Q96MU8 473 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 UVRAGQ9P2Y5 699 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 NKX1-2Q9UD57 310 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-232ENST00000535094 ZMYND8Q9ULU4 1186 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-232ENST00000535094 ESRRAP11474 423 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-232ENST00000535094 ACOT2P49753 483 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 FMO1Q01740 532 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 STAT4Q14765 748 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 PCNX4Q63HM2 1172 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 SEMA4DQ92854 862 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 CEP170P1Q96L14 293 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 VCXQ9H320 206 aa16.86■□□□□ 0.29
MCF2L-232ENST00000535094 UNC5CO95185 931 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 CHRNB2P17787 502 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 MAN1A1P33908 653 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 RPA3P35244 121 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-232ENST00000535094 LRRC36Q1X8D7 754 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 RASIP1Q5U651 963 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 RSAD2Q8WXG1 361 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 WHRNQ9P202 907 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 MARCOQ9UEW3 520 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-232ENST00000535094 KAT6AQ92794 2004 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 CCDC195A0A1B0GUA6 201 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 LIG4P49917 911 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 PEX5P50542 639 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 PARD3BQ8TEW8 1205 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 DNAJC9Q8WXX5 260 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 SEC14L1Q92503 715 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 TTC1Q99614 292 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 TBC1D10AQ9BXI6 508 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 NYAP2Q9P242 653 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 ZFATQ9P243 1243 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 TXNDC9O14530 226 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-232ENST00000535094 ZBED4O75132 1171 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 CETPP11597 493 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 SATB1Q01826 763 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 CHURC1Q8WUH1 139 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 DCLK3Q9C098 648 aa16.85■□□□□ 0.29
MCF2L-232ENST00000535094 SAE1Q9UBE0 346 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-232ENST00000535094 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 ADRB2P07550 413 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 TAC1P20366 129 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 CYP3A7P24462 503 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 FASTKD3Q14CZ7 662 aaKnown RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 SMTNL2Q2TAL5 461 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 SEZ6Q53EL9 994 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 ACAD10Q6JQN1 1059 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 NLRP9Q7RTR0 991 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 CCDC125Q86Z20 511 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 BBOF1Q8ND07 529 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 IMPG2Q9BZV3 1241 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 CCDC160A6NGH7 325 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 CNGA1P29973 690 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 POLGP54098 1239 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 RCN1Q15293 331 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 C6orf163Q5TEZ5 329 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 SCARA5Q6ZMJ2 495 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 MAGEC3Q8TD91 643 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 AGBL1Q96MI9 1066 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 GPR88Q9GZN0 384 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 A0A1W2PPM1 405 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 ARHGAP42A6NI28 874 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 HAUS5O94927 633 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 MTFR1Q15390 333 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 RHOT1Q8IXI2 618 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 FAM163AQ96GL9 167 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 TMEM121Q9BTD3 319 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 TXLNGYQ9BZA5 131 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-232ENST00000535094 ZHX2Q9Y6X8 837 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 GAKO14976 1311 aa16.84■□□□□ 0.29
MCF2L-232ENST00000535094 MT-ND3P03897 115 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms