RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 ASB7Q9H672 318 aa18.37■□□□□ 0.53
VPS51-216ENST00000534591 CABYRO75952 493 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 TNNC2P02585 160 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 ASGR1P07306 291 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 ATN1P54259 1190 aaPredicted RBP18.36■□□□□ 0.53
VPS51-216ENST00000534591 TMEM62Q0P6H9 643 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 NCOA4Q13772 614 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 SNX17Q15036 470 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 NAB2Q15742 525 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 NOTUMQ6P988 496 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 TRAPPC11Q7Z392 1133 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 RSPH3Q86UC2 560 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 CEP120Q8N960 986 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 KAT5Q92993 513 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 TATDN2Q93075 761 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 ANKRD36BP1Q96IX9 119 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 IMPG2Q9BZV3 1241 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 CDHR5Q9HBB8 845 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 NENFQ9UMX5 172 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 GINS2Q9Y248 185 aa18.36■□□□□ 0.53
VPS51-216ENST00000534591 ABL1P00519 1130 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 TMEM191BP0C7N4 346 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 CXCL8P10145 99 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 GRM5P41594 1212 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 OSTNP61366 133 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 ALKBH5Q6P6C2 394 aaKnown RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 SLC27A1Q6PCB7 646 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 RNF180Q86T96 592 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 CD302Q8IX05 232 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 DHX38Q92620 1227 aaKnown RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 PI4K2AQ9BTU6 479 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 CCDC94Q9BW85 323 aaPredicted RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 IRX2Q9BZI1 471 aaPredicted RBP18.35■□□□□ 0.53
VPS51-216ENST00000534591 TRIM10Q9UDY6 481 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 NAGPAQ9UK23 515 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 INTUQ9ULD6 942 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
VPS51-216ENST00000534591 KBTBD13C9JR72 458 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 M0QZ92 97 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.53
VPS51-216ENST00000534591 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 TFAMQ00059 246 aaKnown RBP18.34■□□□□ 0.53
VPS51-216ENST00000534591 RPAINQ86UA6 219 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 NT5DC4Q86YG4 428 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 RNF10Q8N5U6 811 aaKnown RBP18.34■□□□□ 0.53
VPS51-216ENST00000534591 ARRDC4Q8NCT1 418 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 CELF4Q9BZC1 486 aaKnown RBP18.34■□□□□ 0.53
VPS51-216ENST00000534591 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 PLEKHA5Q9HAU0 1116 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 NR2E3Q9Y5X4 410 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 ANK1P16157 1881 aa18.34■□□□□ 0.53
VPS51-216ENST00000534591 BTNL10A8MVZ5 291 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 LACTBL1A8MY62 500 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 ASS1P00966 412 aaKnown RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 SYN1P17600 705 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 FGFR4P22455 802 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 USP8P40818 1118 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 NOP14P78316 857 aaKnown RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 MRPS6P82932 125 aaKnown RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 TRPC3Q13507 836 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 SGSM1Q2NKQ1 1148 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 MROH7Q68CQ1 1323 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 SERINC5Q86VE9 423 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 EFCAB13Q8IY85 973 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 TMEM192Q8IY95 271 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 SLC35F6Q8N357 371 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 TAF4BQ92750 862 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 SECISBP2LQ93073 1101 aaKnown RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 FAM84AQ96KN4 292 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 AGPAT1Q99943 283 aa18.33■□□□□ 0.53
VPS51-216ENST00000534591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.539e-10■■■■■ 86.9
VPS51-216ENST00000534591 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.53
VPS51-216ENST00000534591 CTAGE9A4FU28 777 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 RIOK3O14730 519 aaKnown RBP18.33■□□□□ 0.52
VPS51-216ENST00000534591 NPTXRO95502 500 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 BPIFB4P59827 614 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.52
VPS51-216ENST00000534591 CUL2Q13617 745 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 TUBB2AQ13885 445 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 OLIG1Q8TAK6 271 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 TSEN34Q9BSV6 310 aaKnown RBP18.33■□□□□ 0.52
VPS51-216ENST00000534591 TUBB2BQ9BVA1 445 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 L2HGDHQ9H9P8 463 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 TFR2Q9UP52 801 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 TRPV2Q9Y5S1 764 aa18.33■□□□□ 0.52
VPS51-216ENST00000534591 LAMA2P24043 3122 aaKnown RBP18.32■□□□□ 0.52
VPS51-216ENST00000534591 FANCGO15287 622 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 TACC1O75410 805 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
VPS51-216ENST00000534591 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms