RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TTLL13PA6NNM8 815 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 CCDC188H7C350 402 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 PGRMC1O00264 195 aaKnown RBP14.35□□□□□ -0.11
BEST1-208ENST00000534553 ERLIN2O94905 339 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 ACO1P21399 889 aaKnown RBP14.35□□□□□ -0.11
BEST1-208ENST00000534553 C2orf54Q08AI8 447 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 AMHR2Q16671 573 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 LONRF2Q1L5Z9 754 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 CD302Q8IX05 232 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 RASGEF1CQ8N431 466 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 USP38Q8NB14 1042 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 NLRP7Q8WX94 980 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 ARHGEF26Q96DR7 871 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 VCPIP1Q96JH7 1222 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 FDXACB1Q9BRP7 624 aaPredicted RBP14.35□□□□□ -0.11
BEST1-208ENST00000534553 KATNAL1Q9BW62 490 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 MTMR12Q9C0I1 747 aa14.35□□□□□ -0.11
BEST1-208ENST00000534553 AVENQ9NQS1 362 aaPredicted RBP14.35□□□□□ -0.11
BEST1-208ENST00000534553 VSNL1P62760 191 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 CENPCQ03188 943 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 UBL4BQ8N7F7 174 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 SCLT1Q96NL6 688 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.11
BEST1-208ENST00000534553 MINDY3Q9H8M7 445 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 APOBEC3GQ9HC16 384 aaKnown RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 PCDHB4Q9Y5E5 795 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 SMIM35A0A1B0GVV1 85 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 B4GALT5O43286 388 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 GJB1P08034 283 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 TNFRSF8P28908 595 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 GNA15P30679 374 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 DCAF4L1Q3SXM0 396 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 BEND6Q5SZJ8 279 aaPredicted RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 MARCH8Q5T0T0 291 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 HDXQ7Z353 690 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 TLK2Q86UE8 772 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 THNSL1Q8IYQ7 743 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.114e-20■■■■■ 484.4
BEST1-208ENST00000534553 LCMT1Q9UIC8 334 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
BEST1-208ENST00000534553 NUB1Q9Y5A7 615 aa14.34□□□□□ -0.11
BEST1-208ENST00000534553 A0A1B0GUA9 196 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 CLSTN1O94985 981 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 CYP1A1P04798 512 aaPredicted RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 ATICP31939 592 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 ZNF132P52740 706 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 GPS2Q13227 327 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 ZNF699Q32M78 642 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 SEZ6Q53EL9 994 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 TMEM270Q6UE05 265 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 DNAAF5Q86Y56 855 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 UBR7Q8N806 425 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 RBBP8NLQ8NC74 664 aaPredicted RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 ZNF564Q8TBZ8 553 aaPredicted RBP14.33□□□□□ -0.12
BEST1-208ENST00000534553 FAM212AQ96EL1 285 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 ARID3AQ99856 593 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 AP5M1Q9H0R1 490 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 WNT8AQ9H1J5 351 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 ACBD3Q9H3P7 528 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 PDZD7Q9H5P4 517 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 STIM2Q9P246 746 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 TMEM59LQ9UK28 342 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 PASKQ96RG2 1323 aa14.33□□□□□ -0.12
BEST1-208ENST00000534553 MBLAC1A4D2B0 266 aaPredicted RBP14.32□□□□□ -0.12
BEST1-208ENST00000534553 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
BEST1-208ENST00000534553 CEP104O60308 925 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 KPNA6O60684 536 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 TBC1D8O95759 1140 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 VTNP04004 478 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 STAG3L1P0CL83 205 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 HSPA6P17066 643 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 ARF4P18085 180 aaPredicted RBP14.32□□□□□ -0.12
BEST1-208ENST00000534553 LIN9Q5TKA1 542 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 EEF1DP3Q658K8 133 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 SPOPLQ6IQ16 392 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 KIAA0319LQ8IZA0 1049 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 TTC39CQ8N584 583 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.32□□□□□ -0.12
BEST1-208ENST00000534553 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 GCOM2Q9BZD3 368 aaPredicted RBP14.32□□□□□ -0.12
BEST1-208ENST00000534553 VRTNQ9H8Y1 702 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 RBM12Q9NTZ6 932 aaKnown RBP14.32□□□□□ -0.12
BEST1-208ENST00000534553 COG5Q9UP83 839 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 C2CD2Q9Y426 696 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 ALG6Q9Y672 507 aa14.32□□□□□ -0.12
BEST1-208ENST00000534553 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms