RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 GOLGA8BA8MQT2 603 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 BECN2A8MW95 431 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CCP110O43303 1012 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 EPB41L2O43491 1005 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 NUAK1O60285 661 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 MGRN1O60291 552 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 KDM1AO60341 852 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 JAK2O60674 1132 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 RTN3O95197 1032 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 MAP4K4O95819 1239 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 LRG1P02750 347 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 C4BPAP04003 597 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CYP1A1P04798 512 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FESP07332 822 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 C8BP07358 591 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 NEFHP12036 1026 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ATF2P15336 505 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 PI3P19957 117 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 XPAP23025 273 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ALDH1B1P30837 517 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ABCD1P33897 745 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 RDXP35241 583 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ARHGAP25P42331 645 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ID4P47928 161 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FNTBP49356 437 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 USP14P54578 494 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 INHBCP55103 352 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 MAP3K12Q12852 859 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 PDCLQ13371 301 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 MTX1Q13505 466 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 STIM1Q13586 685 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 E2F5Q15329 346 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SNCBQ16143 134 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF568Q3ZCX4 644 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 AMOTQ4VCS5 1084 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 TTMPQ5BVD1 217 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CEP85LQ5SZL2 805 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF648Q5T619 568 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 PHF19Q5T6S3 580 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SLFN12LQ6IEE8 588 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 WDR93Q6P2C0 686 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CYB5D1Q6P9G0 228 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 RAD9BQ6WBX8 426 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FRMD7Q6ZUT3 714 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 BZW1Q7L1Q6 419 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SPATA21Q7Z572 469 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CEP57Q86XR8 500 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 GSPT2Q8IYD1 628 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC13Q8IYE1 715 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CEP57L1Q8IYX8 460 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FUKQ8N0W3 1084 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 AFAP1L2Q8N4X5 818 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 TC2NQ8N9U0 490 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 B4GALNT2Q8NHY0 566 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FAM76AQ8TAV0 307 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 BCAS4Q8TDM0 211 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 IGDCC4Q8TDY8 1250 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ASB15Q8WXK1 588 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 RILPL2Q969X0 211 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SPDL1Q96EA4 605 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SAAL1Q96ER3 474 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 PHACTR3Q96KR7 559 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ZSCAN31Q96LW9 406 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 JAKMIP1Q96N16 626 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 PUS7Q96PZ0 661 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CDC5LQ99459 802 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 BPIFA3Q9BQP9 254 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ORAI3Q9BRQ5 295 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 TSGA10Q9BZW7 698 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 BRINP2Q9C0B6 783 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SCAND2PQ9GZW5 306 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 CENPHQ9H3R5 247 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 DLL4Q9NR61 685 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 HOMER3Q9NSC5 361 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 SPATS2LQ9NUQ6 558 aaKnown RBP3.52□□□□□ -1.85
CSDE1-216ENST00000534389 NTMQ9P121 344 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 RBPJLQ9UBG7 517 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 FTSJ1Q9UET6 329 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ZFP69BQ9UJL9 534 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ZBTB21Q9ULJ3 1066 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 TELO2Q9Y4R8 837 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ASB1Q9Y576 335 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 KCTD3Q9Y597 815 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ABCC6O95255 1503 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 EFCAB6Q5THR3 1501 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ADGRF5Q8IZF2 1346 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PNMA6EA0A0J9YXQ4 647 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF839A8K0R7 811 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 NPIPB6E9PJ23 425 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ACOT7O00154 380 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 GPR39O43194 453 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 AHCYL1O43865 530 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ERLIN1O75477 346 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 RNF8O76064 485 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 S100BP04271 92 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 MYL1P05976 194 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 C1QTNF9P0C862 333 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ZBTB48P10074 688 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 BPIP17213 487 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ATP5JP18859 108 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms