RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GBP1P32455 592 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 MYO1EQ12965 1108 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 KAZNQ674X7 775 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 CDCA2Q69YH5 1023 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-226ENST00000533820 ACAD10Q6JQN1 1059 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 BICD1Q96G01 975 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 FAM213AQ9BRX8 229 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 LRRC19Q9H756 370 aa20.58■□□□□ 0.89
CAPN1-226ENST00000533820 ASTN2O75129 1339 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-226ENST00000533820 IGF2BP3O00425 579 aaKnown RBP eCLIP20.58■□□□□ 0.88
CAPN1-226ENST00000533820 STX2P32856 288 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 NPTX2P47972 431 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 GTF2BQ00403 316 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 P3H4Q92791 437 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 TBX20Q9UMR3 447 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.88
CAPN1-226ENST00000533820 PI4K2BG5E9Z4 385 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 SPAG7O75391 227 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 CAPRIN2Q6IMN6 1127 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 GSTA5Q7RTV2 222 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 BSNDQ8WZ55 320 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 SNF8Q96H20 258 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 C11orf70Q9BRQ4 267 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 ATP6V0A4Q9HBG4 840 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 AGO4Q9HCK5 861 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 ANKRD31Q8N7Z5 1873 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 LRRC37AA6NMS7 1700 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 P4HA2O15460 535 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 TTC4O95801 387 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 TRMT10CQ7L0Y3 403 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 TGS1Q96RS0 853 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 UVRAGQ9P2Y5 699 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 TELO2Q9Y4R8 837 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 QSER1Q2KHR3 1735 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 FSCN2O14926 492 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 HNRNPDLO14979 420 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 GRIN3BO60391 1043 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 RANBP1P43487 201 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 DDX1Q92499 740 aaKnown RBP20.57■□□□□ 0.88
CAPN1-226ENST00000533820 KIFAP3Q92845 792 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 RMDN2Q96LZ7 410 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 ZNF341Q9BYN7 854 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 KMT5AQ9NQR1 393 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 NINJ2Q9NZG7 142 aa20.57■□□□□ 0.88
CAPN1-226ENST00000533820 NCALDP61601 193 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 MTM1Q13496 603 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 MYBPC2Q14324 1141 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 TMED2Q15363 201 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 C1QTNF12Q5T7M4 302 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 KLHL29Q96CT2 875 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.56■□□□□ 0.88
CAPN1-226ENST00000533820 MTA2O94776 668 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 SUN1O94901 812 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 GAS8O95995 478 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 IVDP26440 423 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-226ENST00000533820 ATP13A4Q4VNC1 1196 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 MRIQ9BWK5 157 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 PLVAPQ9BX97 442 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
CAPN1-226ENST00000533820 MROH7Q68CQ1 1323 aa20.56■□□□□ 0.88
CAPN1-226ENST00000533820 PIAS1O75925 651 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 CCNE2O96020 404 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 CLEC16AQ2KHT3 1053 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 MFSD5Q6N075 450 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 TAB3Q8N5C8 712 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-226ENST00000533820 TMEM161BQ8NDZ6 487 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 NSMCE1Q8WV22 266 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ACSF2Q96CM8 615 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-226ENST00000533820 TMEM109Q9BVC6 243 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 NAALADL1Q9UQQ1 740 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 H0YIN7 160 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 MUTP22033 750 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 SPATA21Q7Z572 469 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 FITM2Q8N6M3 262 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 SPOCK2Q92563 424 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 DCLK3Q9C098 648 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 TMEM8AQ9HCN3 771 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 WHRNQ9P202 907 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ATRNL1Q5VV63 1379 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ZSCAN5DPP0CG00 497 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 KRT10P13645 584 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ITIH2P19823 946 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 DMP1Q13316 513 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-226ENST00000533820 TNFAIP8L3Q5GJ75 292 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 SLC39A4Q6P5W5 647 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ANKS1BQ7Z6G8 1248 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 CROCCP2Q86T23 111 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 MORC4Q8TE76 937 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 AGAP11Q8TF27 550 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 HAUS1Q96CS2 278 aa20.55■□□□□ 0.88
CAPN1-226ENST00000533820 ZNF70Q9UC06 446 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-226ENST00000533820 KRT16P08779 473 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 CAP2P40123 477 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 TAS2R40P59535 323 aa20.54■□□□□ 0.88
CAPN1-226ENST00000533820 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms