RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
CMTM1-217ENST00000533666 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 DCLRE1AQ6PJP8 1040 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 C11orf57Q6ZUT1 292 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-217ENST00000533666 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 COLGALT1Q8NBJ5 622 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 EEF2KMTQ96G04 330 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
CMTM1-217ENST00000533666 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 CASTOR2A6NHX0 329 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 PODXLO00592 558 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 NRP1O14786 923 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 MEFVO15553 781 aaPredicted RBP15.22■□□□□ 0.03
CMTM1-217ENST00000533666 TADA2AO75478 443 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 LRPAP1P30533 357 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 PNPLA4P41247 253 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 CLDN10P78369 228 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 RBP5P82980 135 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 CETN1Q12798 172 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 ELAVL2Q12926 359 aaKnown RBP15.22■□□□□ 0.03
CMTM1-217ENST00000533666 TRPC3Q13507 836 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 TCERG1LQ5VWI1 586 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 FBXO22Q8NEZ5 403 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 C18orf25Q96B23 403 aaPredicted RBP15.22■□□□□ 0.03
CMTM1-217ENST00000533666 FUCA2Q9BTY2 467 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
CMTM1-217ENST00000533666 NLRC5Q86WI3 1866 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 C5orf67F2Z3F1 127 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 B3GAT3O94766 335 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 EEF1GP26641 437 aaKnown RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 MTIF2P46199 727 aaKnown RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 SLC11A1P49279 550 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 MARSP56192 900 aaKnown RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 UBE3AQ05086 875 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 MYO1EQ12965 1108 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 BIRC3Q13489 604 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 NAB2Q15742 525 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 UPP1Q16831 310 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 EPC2Q52LR7 807 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 DCAF17Q5H9S7 520 aaPredicted RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 ZNF697Q5TEC3 545 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 EFCAB13Q8IY85 973 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 ZNF560Q96MR9 790 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 MTMR12Q9C0I1 747 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
CMTM1-217ENST00000533666 PRG3Q9Y2Y8 225 aaPredicted RBP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.03
CMTM1-217ENST00000533666 SF3B1O75533 1304 aaKnown RBP eCLIP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 LRRIQ3A6PVS8 624 aaPredicted RBP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 GOLGA6L19H0YKK7 550 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 TMEM189-UBE2V1I3L0A0 370 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 KRT19P08727 400 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 CLCNKBP51801 687 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 ZNF445P59923 1031 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 MCCD1P59942 119 aaPredicted RBP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 PLCB3Q01970 1234 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 HABP4Q5JVS0 413 aaKnown RBP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 C9orf57Q5W0N0 161 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 TRAPPC11Q7Z392 1133 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 AOPEPQ8N6M6 819 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 ARNTL2Q8WYA1 636 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 IGSF21Q96ID5 467 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 POP1Q99575 1024 aaKnown RBP15.2■□□□□ 0.02
CMTM1-217ENST00000533666 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 IMPG2Q9BZV3 1241 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 CXCL16Q9H2A7 254 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 ZNF576Q9H609 170 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 TMEM8AQ9HCN3 771 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 ADAM28Q9UKQ2 775 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 LZTS1Q9Y250 596 aa15.2■□□□□ 0.02
CMTM1-217ENST00000533666 KCNJ18B7U540 433 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 FGF18O76093 207 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 CLSTN1O94985 981 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 ITGB3P05106 788 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 MXI1P50539 228 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 SOX4Q06945 474 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-217ENST00000533666 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 SV2CQ496J9 727 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 LMBRD2Q68DH5 695 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-217ENST00000533666 KRT39Q6A163 491 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 TRIM59Q8IWR1 403 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 LRRC52Q8N7C0 313 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
CMTM1-217ENST00000533666 KLHL23Q8NBE8 558 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms