RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
COMMD9-208ENST00000533643 ANK1P16157 1881 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 PMM2O15305 246 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 XPOTO43592 962 aaKnown RBP12.87□□□□□ -0.35
COMMD9-208ENST00000533643 VNN1O95497 513 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 TMEM191BP0C7N4 346 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 FMO5P49326 533 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 RABGGTBP53611 331 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 FANCCQ00597 558 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
COMMD9-208ENST00000533643 TUSC3Q13454 348 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 BTG3Q14201 252 aaPredicted RBP12.87□□□□□ -0.35
COMMD9-208ENST00000533643 ZACNQ401N2 412 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 CWH43Q9H720 699 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 CACNG4Q9UBN1 327 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 RALGAPA2Q2PPJ7 1873 aa12.87□□□□□ -0.35
COMMD9-208ENST00000533643 CITO14578 2027 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 PES1O00541 588 aaKnown RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 PPEF2O14830 753 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 TLL1O43897 1013 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 TPM2P07951 284 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 LRPAP1P30533 357 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 MXI1P50539 228 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 BIRC3Q13489 604 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 KRT39Q6A163 491 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 TAS1R2Q8TE23 839 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 FAM193BQ96PV7 902 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 PAAF1Q9BRP4 392 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 DNAJB4Q9UDY4 337 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 AGAP1Q9UPQ3 857 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 COQ4Q9Y3A0 265 aa12.86□□□□□ -0.35
COMMD9-208ENST00000533643 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 MRPL42Q9Y6G3 142 aaKnown RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
COMMD9-208ENST00000533643 FNDC1Q4ZHG4 1894 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 PIRO00625 290 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 P4HA2O15460 535 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 TEX33O43247 280 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 AP5Z1O43299 807 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 PHACTR2O75167 634 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 SERPINC1P01008 464 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 CST3P01034 146 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 ITGB3P05106 788 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 MYOGP15173 224 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 CLCNKBP51801 687 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 RBP5P82980 135 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 MYL7Q01449 175 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 NCOA4Q13772 614 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 UPP1Q16831 310 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 EPC2Q52LR7 807 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 FIBCD1Q8N539 461 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 SEMA4DQ92854 862 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 UROC1Q96N76 676 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 TMEM175Q9BSA9 504 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
COMMD9-208ENST00000533643 IFNKQ9P0W0 207 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
COMMD9-208ENST00000533643 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
COMMD9-208ENST00000533643 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
COMMD9-208ENST00000533643 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 F8W810 466 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 PODXLO00592 558 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 LRRN2O75325 713 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 ALDH2P05091 517 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 GALTP07902 379 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 KRT19P08727 400 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
COMMD9-208ENST00000533643 OR1G1P47890 313 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms