RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LRRN2O75325 713 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 KIF4AO95239 1232 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 YEATS4O95619 227 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 HOXA9P31269 272 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 NTHL1P78549 312 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 PSMD5Q16401 504 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 TMEM119Q4V9L6 283 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 HYIQ5T013 277 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 FAM171A1Q5VUB5 890 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 RRAGBQ5VZM2 374 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 RINT1Q6NUQ1 792 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 GPBP1Q86WP2 473 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 CEP57Q86XR8 500 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 PDILTQ8N807 584 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 LNX1Q8TBB1 728 aaPredicted RBP9.55□□□□□ -0.88
COPB1-210ENST00000533533 HASPINQ8TF76 798 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 RUBCNQ92622 972 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 FGF13Q92913 245 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 CHAMP1Q96JM3 812 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 PRIMPOLQ96LW4 560 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 HINFPQ9BQA5 517 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 DDX23Q9BUQ8 820 aaKnown RBP9.55□□□□□ -0.88
COPB1-210ENST00000533533 RUSC1Q9BVN2 902 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 FZD8Q9H461 694 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 ZHX3Q9H4I2 956 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 PRMT7Q9NVM4 692 aaPredicted RBP9.55□□□□□ -0.88
COPB1-210ENST00000533533 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 CITO14578 2027 aa9.55□□□□□ -0.88
COPB1-210ENST00000533533 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 TTLL13PA6NNM8 815 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PTGESO14684 152 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 CCL16O15467 120 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 ADAM12O43184 909 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 SLC26A4O43511 780 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 CUTAO60888 179 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 HIP1RO75146 1068 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PPP6R2O75170 966 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 XYLBO75191 536 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 THP07101 528 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 C8AP07357 584 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 STAT6P42226 847 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PEX3P56589 373 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 KRT85P78386 507 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 NUCB2P80303 420 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PRKCQQ04759 706 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 ELAVL2Q12926 359 aaKnown RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 MCM6Q14566 821 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 NAB2Q15742 525 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 MLF2Q15773 248 aaPredicted RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 FAM187BQ17R55 369 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 CDCA2Q69YH5 1023 aaPredicted RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 ATL3Q6DD88 541 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PDXDC1Q6P996 788 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 MTSS1LQ765P7 747 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 DGLUCYQ7Z3D6 616 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 MAML2Q8IZL2 1156 aaPredicted RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 SYT2Q8N9I0 419 aaPredicted RBP9.54□□□□□ -0.88
COPB1-210ENST00000533533 SUMF1Q8NBK3 374 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 ITFG1Q8TB96 612 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 RAD54LQ92698 747 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 KIFAP3Q92845 792 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 SPATA32Q96LK8 384 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 CCSER1Q9C0I3 900 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 COL4A3Q01955 1670 aa9.54□□□□□ -0.88
COPB1-210ENST00000533533 CACNA1GO43497 2377 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 MED19A0JLT2 244 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 N4BP3O15049 544 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 KINO60870 393 aaKnown RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 RECQL4O94761 1208 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 FAM13AO94988 1023 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 POU2F2P09086 479 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 NAMPTP43490 491 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 SLC12A3P55017 1021 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 PFKPQ01813 784 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 DMP1Q13316 513 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 RAB33AQ14088 237 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 PUM1Q14671 1186 aaKnown RBP eCLIP9.53□□□□□ -0.88
COPB1-210ENST00000533533 UVSSAQ2YD98 709 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 ZNF528Q3MIS6 628 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 AXDND1Q5T1B0 1012 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.53□□□□□ -0.88
COPB1-210ENST00000533533 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 C1orf186Q6ZWK4 172 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 DCLK2Q8N568 766 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 SLC7A14Q8TBB6 771 aa9.53□□□□□ -0.88
COPB1-210ENST00000533533 BSNDQ8WZ55 320 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms