RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 CNTN6Q9UQ52 1028 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 PODXLO00592 558 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 ERLIN2O94905 339 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 CLTAP09496 248 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 NR1D1P20393 614 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 NSFP46459 744 aaKnown RBP20.61■□□□□ 0.89
UBXN1-215ENST00000533476 TTC27Q6P3X3 843 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 MPHOSPH6Q99547 160 aaKnown RBP20.61■□□□□ 0.89
UBXN1-215ENST00000533476 PAGR1Q9BTK6 254 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 PLVAPQ9BX97 442 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 ASCC2Q9H1I8 757 aaPredicted RBP20.61■□□□□ 0.89
UBXN1-215ENST00000533476 ELP3Q9H9T3 547 aa20.61■□□□□ 0.89
UBXN1-215ENST00000533476 MROH7Q68CQ1 1323 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 DDNO94850 711 aaPredicted RBP20.6■□□□□ 0.89
UBXN1-215ENST00000533476 SLC25A27O95847 323 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 MAGEA9P43362 315 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 SIX1Q15475 284 aaPredicted RBP20.6■□□□□ 0.89
UBXN1-215ENST00000533476 KCTD19Q17RG1 926 aaPredicted RBP20.6■□□□□ 0.89
UBXN1-215ENST00000533476 MON1BQ7L1V2 547 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 BRSK2Q8IWQ3 736 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 AZI2Q9H6S1 392 aa20.6■□□□□ 0.89
UBXN1-215ENST00000533476 CXCL11O14625 94 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 GAS2O43903 313 aaKnown RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 RRM1P23921 792 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 SLC1A1P43005 524 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 FNTAP49354 379 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 AP3M2P53677 418 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 NOP14P78316 857 aaKnown RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 GRM1Q13255 1194 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 DRP2Q13474 957 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 IER5Q5VY09 327 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 CDCA2Q69YH5 1023 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 CCDC137Q6PK04 289 aaKnown RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 ZDHHC24Q6UX98 284 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 RUFY4Q6ZNE9 571 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 ERO1BQ86YB8 467 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 OR5B17Q8NGF7 314 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 PRPF31Q8WWY3 499 aaKnown RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 CPA5Q8WXQ8 436 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 BBXQ8WY36 941 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 OTUD5Q96G74 571 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 PCDHB4Q9Y5E5 795 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 TCRBV7S2A1N4TA0A589 114 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 SRRM3A6NNA2 597 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 ZEB2O60315 1214 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 FAM189A1O60320 539 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 LGR5O75473 907 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 COILP38432 576 aaPredicted RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 OR2W6PQ8NHA6 318 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 TCP11Q8WWU5 503 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 MRPL4Q9BYD3 311 aaKnown RBP20.59■□□□□ 0.89
UBXN1-215ENST00000533476 GRHL1Q9NZI5 618 aa20.59■□□□□ 0.89
UBXN1-215ENST00000533476 MYO1FO00160 1098 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 FSCN2O14926 492 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 CLDN3O15551 220 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 MSCO60682 206 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 RARAP10276 462 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 NCOA4Q13772 614 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 PPP1R2P3Q6NXS1 205 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 C10orf67Q8IYJ2 551 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 ABRAQ8N0Z2 381 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 RBBP8NLQ8NC74 664 aaPredicted RBP20.58■□□□□ 0.88
UBXN1-215ENST00000533476 FGD4Q96M96 766 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 GPR20Q99678 358 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 PARP2Q9UGN5 583 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 AGTPBP1Q9UPW5 1226 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 SNX24Q9Y343 169 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 NUB1Q9Y5A7 615 aa20.58■□□□□ 0.88
UBXN1-215ENST00000533476 TOM1L1O75674 476 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 ARIH2O95376 493 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 GNA15P30679 374 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 ATP1A2P50993 1020 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 NOMO3P69849 1222 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 LIN9Q5TKA1 542 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 AGBL2Q5U5Z8 902 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 TMEM270Q6UE05 265 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 EEPD1Q7L9B9 569 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 WDR49Q8IV35 697 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 EXOC8Q8IYI6 725 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 CYFIP2Q96F07 1278 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 VCPIP1Q96JH7 1222 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 LRRC19Q9H756 370 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 UMODL1Q5DID0 1318 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 SPDYE5A6NIY4 337 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 EBAG9O00559 213 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 TRIM66O15016 1216 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 POTEJP0CG39 1038 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 HARSP12081 509 aaKnown RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 RPL21P46778 160 aaKnown RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 EIF3BP55884 814 aaKnown RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 PDCLQ13371 301 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 MXD4Q14582 209 aaPredicted RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 CELF3Q5SZQ8 465 aaKnown RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 PLPPR4Q7Z2D5 763 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 PHF13Q86YI8 300 aaPredicted RBP20.57■□□□□ 0.88
UBXN1-215ENST00000533476 UBR7Q8N806 425 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 BCAS4Q8TDM0 211 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms