RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 GCNT4Q9P109 453 aa12.26□□□□□ -0.45
GMDS-210ENST00000533279 STK39Q9UEW8 545 aa12.26□□□□□ -0.45
GMDS-210ENST00000533279 NUB1Q9Y5A7 615 aa12.26□□□□□ -0.45
GMDS-210ENST00000533279 TET1Q8NFU7 2136 aa12.26□□□□□ -0.45
GMDS-210ENST00000533279 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
GMDS-210ENST00000533279 DGKIO75912 1065 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 GJB5O95377 273 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ITGB3P05106 788 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ATP1A3P13637 1013 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ATICP31939 592 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 PPM1AP35813 382 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 OR1G1P47890 313 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ALDH7A1P49419 539 aaKnown RBP12.25□□□□□ -0.45
GMDS-210ENST00000533279 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
GMDS-210ENST00000533279 TNNC1P63316 161 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 CLDN10P78369 228 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 NCOA4Q13772 614 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 RAB30Q15771 203 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 TCTN1Q2MV58 587 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ZNF699Q32M78 642 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ZACNQ401N2 412 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 CLLU1OSQ5K130 101 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 SARM1Q6SZW1 724 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 ALKAL1Q6UXT8 129 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 SV2AQ7L0J3 742 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 TRAPPC11Q7Z392 1133 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 IRF2BP1Q8IU81 584 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 FMNL3Q8IVF7 1028 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 EFCAB13Q8IY85 973 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 FIBCD1Q8N539 461 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 TAF4BQ92750 862 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
GMDS-210ENST00000533279 POP1Q99575 1024 aaKnown RBP12.25□□□□□ -0.45
GMDS-210ENST00000533279 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 GRPEL1Q9HAV7 217 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 TBC1D13Q9NVG8 400 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 MSRAQ9UJ68 235 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 DAAM1Q9Y4D1 1078 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 PCDHB12Q9Y5F1 795 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 TTC3P53804 2025 aa12.25□□□□□ -0.45
GMDS-210ENST00000533279 A0A1B0GTH6 734 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 CASTOR2A6NHX0 329 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 LRRC10BA6NIK2 292 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 MEIS3P2A8K0S8 358 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 PODXLO00592 558 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 PTGESO14684 152 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 PMM2O15305 246 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 ALDH2P05091 517 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 RFX1P22670 979 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 LRPAP1P30533 357 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 POLR2BP30876 1174 aaKnown RBP12.24□□□□□ -0.45
GMDS-210ENST00000533279 TAF6P49848 677 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 EPHB4P54760 987 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 DLG4P78352 724 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 ELAVL2Q12926 359 aaKnown RBP12.24□□□□□ -0.45
GMDS-210ENST00000533279 TRIM14Q14142 442 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
GMDS-210ENST00000533279 DRC7Q8IY82 874 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 NEK11Q8NG66 645 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 ZNF558Q96NG5 402 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 NT5C1BQ96P26 610 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 CASD1Q96PB1 797 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 GDF15Q99988 308 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 RAB20Q9NX57 234 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 TUBGCP4Q9UGJ1 667 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 AGAP1Q9UPQ3 857 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 FAN1Q9Y2M0 1017 aa12.24□□□□□ -0.45
GMDS-210ENST00000533279 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 HLA-DRAP01903 254 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 TBXAS1P24557 533 aaPredicted RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 BMP8BP34820 402 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 SHHQ15465 462 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 TDRD10Q5VZ19 366 aaKnown RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 DCLRE1AQ6PJP8 1040 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 DSTYKQ6XUX3 929 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 TDHQ8IZJ6 230 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 TTC39CQ8N584 583 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 C1orf127Q8N9H9 656 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 OR5B17Q8NGF7 314 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 PLEKHO2Q8TD55 490 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 C18orf25Q96B23 403 aaPredicted RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 HPDLQ96IR7 371 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 ZMAT2Q96NC0 199 aaKnown RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
GMDS-210ENST00000533279 INTS2Q9H0H0 1204 aaKnown RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
GMDS-210ENST00000533279 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
GMDS-210ENST00000533279 SF3B1O75533 1304 aaKnown RBP eCLIP12.22□□□□□ -0.459e-6■■■■■ 68.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms